Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00483 ATGGCAAGCAGCCACCCTCGCCAACTGGCAGCCATTCCCCCCAGTAAGATGCAGCAAAGAAGACAACGTAAGATGTTTTCGACATCGGACGACACTGCCATGATGAAGCAAGTTCAGGCCACTCATGCCCCTGATGGTCGTGAAGTTGATGTCAGGCCTGTTCTCCAAATCATTGAGGAAATCTTGATTCATGTCATTGCTCGCACCGTTGACGGTGATGTTGATGGAAAAACAGAACAAGTTGATTCTATGCAGAAGGCTGCTGTCTTTGCTGAGTTGGATATGCTTGATTCCTTGGCCTTTGTTATACACAAGATTTCCTGTGAGTTATCTTACAAGTGCCTAGGAGGTGGAGATGCACATGCAACAACAATGGGGATTCTGAACATGCTCTCTAGCTATTCATGGCATGCAAAAGTGGTGCTAACTTTATCAGCCTTGGCTGTTAACTTTGGAGAATTCTGGCTGGTTGCTCAGTTGGGTGCTACAAACACACTTGCTAAATCTGTGGCTCTGCTCAAGCAACTGCCTGACCTTGTGGAGAACCATGCCCACCTGAAACAGCAATTTGATGCACTGATCAAGCTAGTGAAGGCTATTCTTGATGTGATCAATTGTATCGTTGAGTTCACAGAGCTGCCCACTGAGTACATTTCAGAGGACACTCCTCCAATGTCTGTTGTCAGTGCTCATATTCCTGTTGCTGCCTATTGGACCATCCGAAGTATTGTGGCTTGTGCTTCACAGATTGCAAGTCTTGTTGGATTGAGAAATGAATACGGCTCAGCTGCCACAGAGGCATGGGAACTGTCAAGCTTGGCACATAAGATGAGTAGTATACAAGAGCACCTTCAGAATCAACTGGCCATCTGCTACCAATATATAGATGAGAAGAGGCACATAGAGGCCTTTCGCAATTTGGTTCGTCTTTTTGAGACAGCCCACATAGACAACCTCAAAATTCTCCGAGCATTGATATATGCCAAGGAGGATCCACCCCCTCTCGTAGATGGATCAACCAAAACAAGGGTTAGTTTGGAGGTGCTGAGAAGGAAGCATGTGTTGCTGCTGATATCAGATCTTGATCTCTCACAAGAAGAGATCATAATACTTGATAACCTGTACAAAGATGCACGATCAAGGAGTGAGACTCACTACGAGATGGTATGGATTCCAGTTTTGGACGCAGCAGCCTGGAATGAGTTTGGTCGACAGAAGTTTGAACATTTAAGAGCTTTGATGCCATGGTACAGCGTAAGGGACCCCCTGATCATCGAATCACATGTGATAAAATATATCAGAGAGGTTTGGAATTTCACAAAGAGTGCCATCTTAGTGGCCCTTGATCCACAGGGCAGGCTATCCTCTCCCAACGCCCTCCACATGTACTGGATTTGGGGTAACCTGGCCTTTCCCTTCACTCGCGAGAAGGAAGAATCATTGTGGAAGTCAGAAATCTGGAGCCTTGAGCTGCTTGTTGATGGCATTGATCCTACAGTTATAGAATGGATGGCAGTTGAAAGCAAACACATATGCCTGTATGGAGGTGAAGATCTTGAATGGATTCAAACATTCACAACCACTGCCATGGGAGTGGCAAGAGCGAACAACATCACATTGGAGATGGTTTATGTGGGGAAGAACAACGCCAAAGAGAGGATGCAGAGAATGATCAACACGTTCGCAAACAAAAAGTTCAGCTACTTCTGGCCAAACGTGACGTCCATATGGTTCTTCTGGACAAGGTTGGAGAGCATGCTGTACTCAAAGCTGCAGCACGGGAAGACTGTGGAGAGCGACCAGATTATGAGCGAGGTGATGACAGTGCTGAGCTTCGACGGCAGCGATCAAGGGTGGGCTATATTCTGGAAAGGAGGACATGAGATGGCCAGAGCTAAGGGAGACACGGCGCTGAAATGCCTGAGTGAGTTCGAGAACTGGAAGGAAAGTGCAATAAGAGATGGATTTATTCCGGCCATGAATGAATATCTGAAGCAACTTCACACACCACATCACTGTAATAGGCTCATACTTCCGGGGAGCACTGGAGGGATTCCAGAGAAAGTTGTGTGCGCTGAATGTGGGCGTGCAATGGAGAAGTACTTCATGTATCGCTGTTGTGTGGAGTGA 2130 0.4667 MASSHPRQLAAIPPSKMQQRRQRKMFSTSDDTAMMKQVQATHAPDGREVDVRPVLQIIEEILIHVIARTVDGDVDGKTEQVDSMQKAAVFAELDMLDSLAFVIHKISCELSYKCLGGGDAHATTMGILNMLSSYSWHAKVVLTLSALAVNFGEFWLVAQLGATNTLAKSVALLKQLPDLVENHAHLKQQFDALIKLVKAILDVINCIVEFTELPTEYISEDTPPMSVVSAHIPVAAYWTIRSIVACASQIASLVGLRNEYGSAATEAWELSSLAHKMSSIQEHLQNQLAICYQYIDEKRHIEAFRNLVRLFETAHIDNLKILRALIYAKEDPPPLVDGSTKTRVSLEVLRRKHVLLLISDLDLSQEEIIILDNLYKDARSRSETHYEMVWIPVLDAAAWNEFGRQKFEHLRALMPWYSVRDPLIIESHVIKYIREVWNFTKSAILVALDPQGRLSSPNALHMYWIWGNLAFPFTREKEESLWKSEIWSLELLVDGIDPTVIEWMAVESKHICLYGGEDLEWIQTFTTTAMGVARANNITLEMVYVGKNNAKERMQRMINTFANKKFSYFWPNVTSIWFFWTRLESMLYSKLQHGKTVESDQIMSEVMTVLSFDGSDQGWAIFWKGGHEMARAKGDTALKCLSEFENWKESAIRDGFIPAMNEYLKQLHTPHHCNRLILPGSTGGIPEKVVCAECGRAMEKYFMYRCCVE 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00483 709 Pfam Sieve element occlusion C-terminus 477 707 IPR027944 -
Accr12g00483 709 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 16 708 IPR039299 GO:0010088
Accr12g00483 709 MobiDBLite consensus disorder prediction 1 31 - -
Accr12g00483 709 Pfam Sieve element occlusion N-terminus 29 315 IPR027942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00483 Accr-Chr12 4475098 4477932 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00483 - - pcin:129320468 1299.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00483 12 4475098 4477932 Accr12g00483 12 4475098 4477932 ECH