Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00470 ATGCCCGAACCAGTGGAACCTCAGAATCATGTGCTGCTACCAAAACCGGAGTTGGGAGCAGCAGAGAGCTCCAAGGTTCTCCAGCCTCCGAAGTTCGTCGTCTTGGCTGACCTCAACGTCGATCCTCCTGAAGCAGACGAGGATGATTCCCCCCATGTGCCTCCGCCAGAAATCACCATGTTAACAAATGAAAAAAGTCAAGAGAAGAGTACATTGTCCAAAGATGCCGACAGTGCTGACGGTGAAGGTAAAAAATTGCACAAACTGGGGAAGTGCCGCTCCAGATTTAGTAAGACAGATTCTTCTGTTGATTGCGGAGCTGATGGAGATGGTGATCAGCATGTTCAAGGTGTCGCTTCCTCTCGAGAGGAAAAAGTTAGCAGTCTGAAGACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCGCATGCTCATTTCATTCTTGGCCTAATGTACCAAAGGTTGGGCCAACCTCAAAAGGCTCTATCGGCATATGAGAAGGCTGCAGAGATCTTACTTCGGTCCGAGGCTGAGATTAGTCGGCCAGAGTTGCTTTCTTTAGTTCAAATTCACCATGCACAGTGCCTGATACTAGAAAGTGCAGTGGAAAATAGTTCAGATAAAGAACTTGAACCTCAAGAACTTGAGGAAATTCTCTCCAAACTAAAGGAATCTGTGCAATCAGATATCAGGCAGGCAGCTGTATGGAATACCCTAGGATTTGTGCTTCTTAAAACAGGTCGTTTGCAGAGTGCAATCACAGTACTGTCATCATTGTTGGCTATTGCACCTGACAACTGTGATTGCCTGGAAAATCTTGGGATTTCTTATCTTCAAAGTGGGAATTTGGAATTATCTGCAAAATGTTTCCAAGAGTTGATTCTAAAAGATCAAAATCATCCTGCAGCTTTAATCAACTATGCTGCCCTTCTTTTATGTAAATATGCTTCAGTTGTCACAGGTGCTGGTGCAAGTGCTTCAGAACATGCTTCTGCAGACCGGGTTGCGGCTATTACTGTTGCAAAGGAATGTTTGCTAGCTGCAGTAAAAGCAGATCCCAAATCAGGACATATCTGGACAAATCTTGCCAATGCATTTTCTCTATGTGGTGATCATAGAAGTTCTAGCAAGTGCTTGGAGAAGGCAGCAAGACTGGACCCCAATTGCATGTCTACTCGATATGCTGTTGCCATCCATAGAATAAAGGATGCTGAAAGATCTCTAGATCGGGAGCAGCTTTCTTGGGCTGGAAATGAGATGGCTTCTATAATAAGAGATGGTGATTCATCCTTGGTTGAGCTTCCCGTAGCATGGGCTGGGCTTGCCATGGTTCACAAGGCCCAACATGAAATAGCAGCCGCTTTTGAGACCGAACAGCATGACCTGATGGAAGTTGAAGAGCGTGCTGTTTGCGTTTTAAAACAGGCTATAGCAGAAGATCCAGATGATGCTGTGCAGTGGCACCAACTCGGTCTTCATGGTCTCTGTACTCGGCAATTCAAAACATCTCAAAGGTACCTCAAAGCTGCTGTTGCCCGTGACAAGAATAACAGCTATGCATGGTCAAATCTAGGCGTTTCACTTCAACTATCAGAAGAGCCATCAGAAGCCGAAGAAGTATATAAGCAGGCACTGGCACTAGCGACAACACAACAAGCGCATGCTATATTATCCAATGTGGGGAATCTCTATCGCCAGCAGAAACAATATCAACGTGCCAAGGCAATGTTTACAAAGTCACTTGAACTACAACCTGGCTACGCTCCTGCATATAACAATCTGGGTCTCGTTTTTGTTGCCGAGGGTCTGTTGGAAGAGGCCAAGTATTGTTTTGACAAGGCCCTCCAATCAGATCCTTTACTGGATGCAGCAAAGTCTAACGAGATTAAGGCGGTTGCCATGTCAAAGTTAGGCAGAGGCCTCTCCTCATGCGTTCTTAAAGAATAG 1953 0.4547 MPEPVEPQNHVLLPKPELGAAESSKVLQPPKFVVLADLNVDPPEADEDDSPHVPPPEITMLTNEKSQEKSTLSKDADSADGEGKKLHKLGKCRSRFSKTDSSVDCGADGDGDQHVQGVASSREEKVSSLKTGLVHVARKMPKNAHAHFILGLMYQRLGQPQKALSAYEKAAEILLRSEAEISRPELLSLVQIHHAQCLILESAVENSSDKELEPQELEEILSKLKESVQSDIRQAAVWNTLGFVLLKTGRLQSAITVLSSLLAIAPDNCDCLENLGISYLQSGNLELSAKCFQELILKDQNHPAALINYAALLLCKYASVVTGAGASASEHASADRVAAITVAKECLLAAVKADPKSGHIWTNLANAFSLCGDHRSSSKCLEKAARLDPNCMSTRYAVAIHRIKDAERSLDREQLSWAGNEMASIIRDGDSSLVELPVAWAGLAMVHKAQHEIAAAFETEQHDLMEVEERAVCVLKQAIAEDPDDAVQWHQLGLHGLCTRQFKTSQRYLKAAVARDKNNSYAWSNLGVSLQLSEEPSEAEEVYKQALALATTQQAHAILSNVGNLYRQQKQYQRAKAMFTKSLELQPGYAPAYNNLGLVFVAEGLLEEAKYCFDKALQSDPLLDAAKSNEIKAVAMSKLGRGLSSCVLKE 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00470 650 Gene3D Tetratricopeptide repeat domain 194 468 IPR011990 GO:0005515
Accr12g00470 650 MobiDBLite consensus disorder prediction 37 85 - -
Accr12g00470 650 Pfam Tetratricopeptide repeat 359 391 IPR019734 GO:0005515
Accr12g00470 650 SUPERFAMILY TPR-like 137 177 IPR011990 GO:0005515
Accr12g00470 650 Pfam Tetratricopeptide repeat 522 551 IPR019734 GO:0005515
Accr12g00470 650 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 29 646 - -
Accr12g00470 650 Gene3D Tetratricopeptide repeat domain 556 633 IPR011990 GO:0005515
Accr12g00470 650 ProSiteProfiles TPR repeat profile. 590 623 IPR019734 GO:0005515
Accr12g00470 650 ProSiteProfiles TPR repeat profile. 144 177 IPR019734 GO:0005515
Accr12g00470 650 ProSiteProfiles TPR repeat profile. 556 589 IPR019734 GO:0005515
Accr12g00470 650 MobiDBLite consensus disorder prediction 1 24 - -
Accr12g00470 650 Gene3D Tetratricopeptide repeat domain 129 191 IPR011990 GO:0005515
Accr12g00470 650 MobiDBLite consensus disorder prediction 100 124 - -
Accr12g00470 650 SUPERFAMILY TPR-like 210 621 IPR011990 GO:0005515
Accr12g00470 650 MobiDBLite consensus disorder prediction 68 85 - -
Accr12g00470 650 SMART tpr_5 590 623 IPR019734 GO:0005515
Accr12g00470 650 SMART tpr_5 556 589 IPR019734 GO:0005515
Accr12g00470 650 SMART tpr_5 144 177 IPR019734 GO:0005515
Accr12g00470 650 SMART tpr_5 235 268 IPR019734 GO:0005515
Accr12g00470 650 SMART tpr_5 486 519 IPR019734 GO:0005515
Accr12g00470 650 SMART tpr_5 520 553 IPR019734 GO:0005515
Accr12g00470 650 SMART tpr_5 269 302 IPR019734 GO:0005515
Accr12g00470 650 SMART tpr_5 358 391 IPR019734 GO:0005515
Accr12g00470 650 Pfam Tetratricopeptide repeat 144 173 IPR013105 -
Accr12g00470 650 ProSiteProfiles TPR repeat profile. 235 268 IPR019734 GO:0005515
Accr12g00470 650 Gene3D Tetratricopeptide repeat domain 469 555 IPR011990 GO:0005515
Accr12g00470 650 ProSiteProfiles TPR repeat region circular profile. 590 621 - -
Accr12g00470 650 Pfam Tetratricopeptide repeat 556 618 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00470 471 641 Glycosyltransferase AT3G04240 26.744 2.51e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00470 - - qsa:O6P43_030786 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00470 12 4340164 4345205 Accr12g00470 12 4340164 4345205 ECH