Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00465 ATGGGGAAGAAGACGAAGAAGCCCGGGAAAGGCAAGGAGAAAACGGAGAGAAAAACTGCGAAAGCAGAGGAGAAGAGAGCTCGCAGGGAGACGAAGAACTTTTCTCCCGAGGACGATATCGATGCTATACTGTTAAGTATACAAAAAGAGGAGGCCAAAAAGAAGGAAGTTCATGTTGAAGACAATGTTCCTGCACCTTCTCCTCGATCCAACTGCACGCTCACAGTTAATCCCTTGAAAGAGACAGAGTTGATTCTTTATGGTGGTGAATTTTACAATGGTAACAAGACTTTTGTCTATGGTGATCTTTACCGATATGATGTGGAGAAGCTGGAATGGAAATTAATTTCAAGTCCCAATAGTCCTCCTCCTCGCAGTGCTCATCAGGCAGTTGCTTGGAAGAATTATCTTTATATTTTTGGTGGTGAATTCACATCTCCAAACCAAGAACGATTTCATCATTACAAGGACTTTTGGATGTTGGACCTGAAAACAAATCAATGGGAACAACTTAATTTGAAGGGGTCCCCTAGCCCCCGCTCAGGACATCGAATGGTATTGTACAAGCACAAGATTATTGTTTTTGGTGGCTTCTATGACACTCTTAGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAACCTAATCTTGGTGTGATGTGGCCAAGTGGGCGGAGTGGTTTTCAGTTATTTGTTTACCAAGATGAGATTTTTTTGTACGGGGGCTATTCAAAAGAAGTTTCATCTGATAAGAATATCTCTGAGAAAGGGATTGTTCATTCGGACATGTGGTCCCTTGATCCTAAGACTTGGGAATGGAACAAGGTCAAGAAAAGTGGAATGCCTCCTGGGCCTCGTGCTGGGTTTTCCATGTGTGTTCAGAAGAGGAGGGCTGTGCTATTTGGAGGTGTTGTGGATATGGAAGTTGAAGGTGATAAAATGATGAGCTTGTTCTTAAATGAGCTTTATGGCTTTCAATTAGATAATAATCGCTGGTATCCATTGGAGTTAAGAAAGGAAAAGTCAACGAAAGATAAGTTAAAAAAGAATGAACGGAAGCCTATAAATAATGTTGATGACAAAACAAATCCTCAATTGGAAGAAGGAGAAGAAAATGAGGATTCAGAATGCCAAGAAGAAGAAAGCAATGTGGGAGTCAACATTGATAATTTATCCCAGATTATTAAGTCAAATATGACTATTGCTGATAGTGCAACAGCTGAATCTGAAAGGAACCTGCAGGAACCTGATGTTAGCCTGGACACTCAAAGTTCTTTGCCTGAGGTGGTAAAGCCTTGTGGACGTATTAATGCCTGCATGGCTGTTGGGAGAGATACATTATACTTGTATGGTGGAACAATGGAGATTAAGGATCAGGAAATCACTCTTGATGACTTGTATACTCTGAATCTTAGCAAACTTGATGAATGGAAGTGCATTAAACCGGCATCAGAATCTGAATGGGTGGAGGTTTCAGATGATGATGATGAGGATGATGATGAGGATGATGAAGAAGATGGTGAAGATGAGTCTGATGGTGATACCCTAAGTGATGAGGATGAGAATGAATCGGTTAAAGTGGGAGATGCTGTTGCTTTGATCAAGGGTGGGGTGAAAAATCTGCGGAGAAAAGAAAGAAGGTCACGGATAGAACAGATCAGAGCAAGCCTCGGCTTGTCAGACTCACAAAGAACACCAACGCCGGGAGAATCCTTGAGGGATTTCTATAGACGTACAGATTTGTATTGGCAAATGGCTGCTCATGAACATACTCAACACACTGGAAAGGAACTCCGCAAGGATGGGTTTGATCTTGCCGAAGCTCGATACAGGGAGCTAAAGCCTATTCTTGATGAGCTGGCCCTATTAGAAACTGAGCAGAAAGCTGAAGAGGAAGAAGGGCCTGAAACTAGTTCAAACAAAAGAGGAAAGAAGAAGACTAGAAACTGA 1983 0.416 MGKKTKKPGKGKEKTERKTAKAEEKRARRETKNFSPEDDIDAILLSIQKEEAKKKEVHVEDNVPAPSPRSNCTLTVNPLKETELILYGGEFYNGNKTFVYGDLYRYDVEKLEWKLISSPNSPPPRSAHQAVAWKNYLYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGSPSPRSGHRMVLYKHKIIVFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPNLGVMWPSGRSGFQLFVYQDEIFLYGGYSKEVSSDKNISEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVQKRRAVLFGGVVDMEVEGDKMMSLFLNELYGFQLDNNRWYPLELRKEKSTKDKLKKNERKPINNVDDKTNPQLEEGEENEDSECQEEESNVGVNIDNLSQIIKSNMTIADSATAESERNLQEPDVSLDTQSSLPEVVKPCGRINACMAVGRDTLYLYGGTMEIKDQEITLDDLYTLNLSKLDEWKCIKPASESEWVEVSDDDDEDDDEDDEEDGEDESDGDTLSDEDENESVKVGDAVALIKGGVKNLRRKERRSRIEQIRASLGLSDSQRTPTPGESLRDFYRRTDLYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLETEQKAEEEEGPETSSNKRGKKKTRN 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00465 660 MobiDBLite consensus disorder prediction 1 37 - -
Accr12g00465 660 SUPERFAMILY Kelch motif 82 491 IPR015915 GO:0005515
Accr12g00465 660 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 653 - -
Accr12g00465 660 MobiDBLite consensus disorder prediction 354 394 - -
Accr12g00465 660 Pfam Galactose oxidase, central domain 135 187 - -
Accr12g00465 660 Gene3D - 43 368 IPR015915 GO:0005515
Accr12g00465 660 MobiDBLite consensus disorder prediction 636 660 - -
Accr12g00465 660 MobiDBLite consensus disorder prediction 12 37 - -
Accr12g00465 660 MobiDBLite consensus disorder prediction 636 653 - -
Accr12g00465 660 Coils Coil 12 32 - -
Accr12g00465 660 MobiDBLite consensus disorder prediction 354 369 - -
Accr12g00465 660 MobiDBLite consensus disorder prediction 500 530 - -
Accr12g00465 660 MobiDBLite consensus disorder prediction 377 391 - -
Accr12g00465 660 Pfam Galactose oxidase, central domain 451 494 - -
Accr12g00465 660 Pfam Galactose oxidase, central domain 68 122 - -
Accr12g00465 660 MobiDBLite consensus disorder prediction 496 539 - -
Accr12g00465 660 Pfam Domain of unknown function (DUF4110) 569 655 IPR025183 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00465 Accr-Chr12 4311503 4319790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00465 166 343 Acyl Lipid Metabolism Gene Families AT3G05420 25.926 1.05e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00465 - - gmx:100818228 1035.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00465 12 4311503 4319790 Accr12g00465 12 4311503 4319790 ECH