Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01970 ATGGAAAGCCAAAGGTGGAAAGAAAATGACAATCAGTTTTTGTCTGAATATGATGATCGATGCGTATCCAAGAGAAAGCATAGCCCGCCCCTTCCACCCACTGCATTTCCTCCTAGCCTAGGCTACATCCAACACCCTGTCTCAAAATTGGACACTCTTGCTGGAATCGCAATCAAGTACGGCGTCGAGGTATCAGACATCAAAAGAATGAATGGCCTCGTTACAGACCTTCAGATGTTTGCTCTTAAAACTCTTCACATCCCACTTGGGGGAAGACACCCCCCACCAGATGATTCTACTACTTCAGGAAACAGAACACCAGATGAACTGTTTGATTCGCAACATTCTTTGACAACAAATTCTCCCCAGCGGAAGTCCTCCCCTGTTGGCAACTCTTTGCAGGGTTTCTATAGAATAAAACCAACGGACAAGAAAACCATATCCGATGACTTGCAGGTGGCAGGGAGCAGAAAAGGGGCTTCTAATTTCTCTTCAGACTCAGCTTCGCCCCTCCAACCTCTGAGTCGCCACCGAAAATCCAGAAGTCTAGTTGATGTCATTTTGAGTGAGATTAAGGAGCAGCATGATATCGTGCCCGCTGCACAGGAGACGCTCTTGAGGGAGGATAATAGCAGCAGCTGCGGATTCCCATCAAGAACAGGAAAAGGTTTGGCTCTCAGACAGAAATCAGCAAGCCGAGCTTCGTTGATCACAGATTCTGAAGCTAGTGGCTCAAATTCTGGGCCAATTGGTGTGGAGGATATATTCCGAACTGTCGGTACCCTTGGTGTTAAGAAATCATCGAGCGCATCATGCTTACATGAAGAGGGTAGTAGCCCCACATCTATCTGGCCAACCTCAAAATGGAGTTTGACATCAGATTTTCAGGCCTTTGCAGCTGCAAAACCAATATTTGATGGCTTGCCCAAACCCACAGCTGGTCGCAGAAACAAAGCTGCACTTGATAAACATATATAG 978 0.4663 MESQRWKENDNQFLSEYDDRCVSKRKHSPPLPPTAFPPSLGYIQHPVSKLDTLAGIAIKYGVEVSDIKRMNGLVTDLQMFALKTLHIPLGGRHPPPDDSTTSGNRTPDELFDSQHSLTTNSPQRKSSPVGNSLQGFYRIKPTDKKTISDDLQVAGSRKGASNFSSDSASPLQPLSRHRKSRSLVDVILSEIKEQHDIVPAAQETLLREDNSSSCGFPSRTGKGLALRQKSASRASLITDSEASGSNSGPIGVEDIFRTVGTLGVKKSSSASCLHEEGSSPTSIWPTSKWSLTSDFQAFAAAKPIFDGLPKPTAGRRNKAALDKHI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01970 325 PANTHER LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN 5 249 IPR045030 -
Accr10g01970 325 ProSiteProfiles LysM domain profile. 43 87 IPR018392 -
Accr10g01970 325 MobiDBLite consensus disorder prediction 152 177 - -
Accr10g01970 325 MobiDBLite consensus disorder prediction 97 133 - -
Accr10g01970 325 Gene3D LysM domain 36 94 IPR036779 -
Accr10g01970 325 Pfam LysM domain 47 88 IPR018392 -
Accr10g01970 325 MobiDBLite consensus disorder prediction 88 135 - -
Accr10g01970 325 CDD LysM 51 87 IPR018392 -
Accr10g01970 325 SUPERFAMILY LysM domain 43 88 IPR036779 -
Accr10g01970 325 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01970 Accr-Chr10 44178699 44181111 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01970 - - pcin:129311168 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01970 10 44178699 44181111 Accr10g01970 10 44178699 44181111 ECH