Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01890 ATGTCAACATTGACCACTCCTCCTCCTGACATATTTTCTGCTCGTGACGATGTTCCTCGCCTCCGCAAAGCTTTGAAAAAAGGAATACGCTGCAAAACTTCAGTAGTTATAGAAATCCTTGCTCATAGAGATTCAACGCAAAGAGACCTCATTCTTCAAGAATATGAAACTACATATTCTGAACCCCTTACCAAACGTATCAGTTCAGAACTTCATGGGAATCTCAAGAAAGCAATGCTTCTTTGGATGGATGAACCCGCCAATAGGGATGCTACAGTAGCAAGGCAAGCCTTGACTTCACCTCTCGTTGATTATCAAGCTATAACTGAAGTGATATGTTCTCGCTCTCCATCACAAATAAGGCGCTTTAAAGAAGTTTATCAGAAAGTATACCATACTCGCTTAGAAAGGGACATTGAAGACTCTCTTTCCGGTGATCTCAAAAAGCTGTTGCATGAATACATAAGCGTACCGCGTTATGAAGGGCCAGAATTTGATCAAGAGATAGTGGAGAAGGACGCTATGGATCTGTATAAAGCGGGGGAGGGGAAGATGCTAGGGACTAATGAGAAGACTTTCATAAGGATTTTTAGTGACAGAAGCAGGGCACATTTGGCTGCTATTGCCAAAGCATATGAAAGAAGCAATGGCCACTCACTGGAAAAGGCTCTAAAGAATGAAACAAGTGGCTATTTTGAAAGGGGCCTCTTCGCCATTCTTCGATGTGCTACTAATCCTGCACTGTACTTCGCCAAGATTCTGAGGAAAGCAATGAAGGGTTTGGGAACTGACGATAGTAGATTAATCAGAGTAATTGTGACAAGAACCGAGATTGATATGGAGCAAATAAAAGAAGCATACCTCTCAAGATATGAGAAATCATTATCCAATGCTGTTCGATCAGACACATCAGGCCATTATAAGGACTTTCTTCTATCTCTCATAGGCAGCGATGATATGGAGACAAGAGTCCTATGA 978 0.4182 MSTLTTPPPDIFSARDDVPRLRKALKKGIRCKTSVVIEILAHRDSTQRDLILQEYETTYSEPLTKRISSELHGNLKKAMLLWMDEPANRDATVARQALTSPLVDYQAITEVICSRSPSQIRRFKEVYQKVYHTRLERDIEDSLSGDLKKLLHEYISVPRYEGPEFDQEIVEKDAMDLYKAGEGKMLGTNEKTFIRIFSDRSRAHLAAIAKAYERSNGHSLEKALKNETSGYFERGLFAILRCATNPALYFAKILRKAMKGLGTDDSRLIRVIVTRTEIDMEQIKEAYLSRYEKSLSNAVRSDTSGHYKDFLLSLIGSDDMETRVL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01890 325 Gene3D Annexin 85 155 IPR037104 GO:0005509|GO:0005544
Accr10g01890 325 ProSiteProfiles Annexin repeat profile. 245 316 IPR018502 GO:0005509|GO:0005544
Accr10g01890 325 PRINTS Annexin family signature 302 315 IPR001464 GO:0005509|GO:0005544
Accr10g01890 325 PRINTS Annexin family signature 258 278 IPR001464 GO:0005509|GO:0005544
Accr10g01890 325 PRINTS Annexin family signature 67 83 IPR001464 GO:0005509|GO:0005544
Accr10g01890 325 PRINTS Annexin family signature 178 204 IPR001464 GO:0005509|GO:0005544
Accr10g01890 325 PRINTS Annexin family signature 27 49 IPR001464 GO:0005509|GO:0005544
Accr10g01890 325 PRINTS Annexin family signature 94 115 IPR001464 GO:0005509|GO:0005544
Accr10g01890 325 ProSiteProfiles Annexin repeat profile. 168 241 IPR018502 GO:0005509|GO:0005544
Accr10g01890 325 ProSiteProfiles Annexin repeat profile. 12 84 IPR018502 GO:0005509|GO:0005544
Accr10g01890 325 FunFam Annexin 246 317 - -
Accr10g01890 325 Pfam Annexin 173 239 IPR018502 GO:0005509|GO:0005544
Accr10g01890 325 Pfam Annexin 249 314 IPR018502 GO:0005509|GO:0005544
Accr10g01890 325 Pfam Annexin 20 81 IPR018502 GO:0005509|GO:0005544
Accr10g01890 325 Pfam Annexin 90 152 IPR018502 GO:0005509|GO:0005544
Accr10g01890 325 SUPERFAMILY Annexin 5 319 IPR037104 GO:0005509|GO:0005544
Accr10g01890 325 FunFam Annexin 159 245 - -
Accr10g01890 325 PANTHER ANNEXIN 14 314 - -
Accr10g01890 325 SMART annex3 30 82 IPR018502 GO:0005509|GO:0005544
Accr10g01890 325 SMART annex3 187 239 IPR018502 GO:0005509|GO:0005544
Accr10g01890 325 SMART annex3 103 154 IPR018502 GO:0005509|GO:0005544
Accr10g01890 325 SMART annex3 262 314 IPR018502 GO:0005509|GO:0005544
Accr10g01890 325 Gene3D Annexin 159 245 IPR037104 GO:0005509|GO:0005544
Accr10g01890 325 Gene3D Annexin 246 317 IPR037104 GO:0005509|GO:0005544
Accr10g01890 325 Gene3D Annexin 2 84 IPR037104 GO:0005509|GO:0005544
Accr10g01890 325 ProSitePatterns Annexin repeat signature. 262 314 IPR018252 GO:0005509|GO:0005544
Accr10g01890 325 ProSiteProfiles Annexin repeat profile. 85 156 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01890 Accr-Chr10 43474416 43486759 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01890 K17098 - gmx:100799388 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01890 10 43474416 43486759 Accr10g01890 10 43474416 43486759 ECH