Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01884 ATGGCAACTACTCTGTCCTCTCAGATTTCGCTTCTTCAACCCAATCGTTCTCTGAATCTCAGAACTCACCAGTTTTCTGGCGTGGTTCAGAATCTCCGGATTCAGCCTACTTCCTCAAATGTGCGATATCTGGCCAAAATGAAGAATGGGTTCGTCCCAAAAGCCTCCGCGGGTGCCATCACGTTGGATTCTAACTCTCAAGTCTCAGTCACAGCGACCAGTAGTCCGATTATTGTCATTGACAACTACGACAGTTTTACCTATAATCTTTGCCAGTACATGGGAGAGCTGGGATTTCGCTTTGAGGTATACCGCAATGATGAATTAACAGTTGAGGAGTTAAAGAGGAAAAATCCTAGAGGTGTGCTAATATCACCTGGTCCTGGCATACCTCAAGATTCTGGCATATCTTTGCAAACAGTTTTGGAACTTGGACCAACTGTACCTTTATTTGGTGTGTGCATGGGCTTGCAATGTATTGGAGAAGCTTTTGGTGGAAAGATTGTGCGTTCTCCTCAAGGTGTTATGCATGGAAAAAGCTCTTTGGTGTATTATGATGAGAAGGGAGAAGATGGATTATTGTCTGGGTTACCGAACCCTTTCACTGCTGGTAGATATCATAGCCTTGTAATTGAAAAAGAGAGTTTTCCTCATGAAGAACTTGAGGTGACAGCCTGGACAGAGGATGGTCTTATAATGGCTGCCCGTCACAAGAGATATAAGCATTTGCAGGGGGTTCAATTTCATCCAGAGAGCATTATAACCACCGAAGGCAGGACGATTGTCGGCAATTTTGCCAAGCTTATAGAGAAGAAGGAGGCTGAGGCTGTCAAAAAATGA 840 0.4417 MATTLSSQISLLQPNRSLNLRTHQFSGVVQNLRIQPTSSNVRYLAKMKNGFVPKASAGAITLDSNSQVSVTATSSPIIVIDNYDSFTYNLCQYMGELGFRFEVYRNDELTVEELKRKNPRGVLISPGPGIPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPQGVMHGKSSLVYYDEKGEDGLLSGLPNPFTAGRYHSLVIEKESFPHEELEVTAWTEDGLIMAARHKRYKHLQGVQFHPESIITTEGRTIVGNFAKLIEKKEAEAVKK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01884 279 PRINTS Anthranilate synthase component II signature 77 91 - -
Accr10g01884 279 PRINTS Anthranilate synthase component II signature 175 183 - -
Accr10g01884 279 PRINTS Anthranilate synthase component II signature 149 160 - -
Accr10g01884 279 PRINTS Anthranilate synthase component II signature 122 131 - -
Accr10g01884 279 PRINTS Anthranilate synthase component II signature 245 258 - -
Accr10g01884 279 PRINTS Anthranilate synthase component II signature 198 210 - -
Accr10g01884 279 SUPERFAMILY Class I glutamine amidotransferase-like 77 271 IPR029062 -
Accr10g01884 279 Gene3D - 75 268 IPR029062 -
Accr10g01884 279 CDD GATase1_Anthranilate_Synthase 77 265 IPR006221 -
Accr10g01884 279 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 119 133 - -
Accr10g01884 279 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 149 165 - -
Accr10g01884 279 Coils Coil 269 279 - -
Accr10g01884 279 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 76 275 - -
Accr10g01884 279 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 66 273 - -
Accr10g01884 279 FunFam Anthranilate synthase beta subunit 1 75 268 - -
Accr10g01884 279 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 77 267 IPR006221 -
Accr10g01884 279 PRINTS Glutamine amidotransferase superfamily signature 122 131 - -
Accr10g01884 279 PRINTS Glutamine amidotransferase superfamily signature 245 258 - -
Accr10g01884 279 PRINTS Glutamine amidotransferase superfamily signature 149 160 - -
Accr10g01884 279 Pfam Glutamine amidotransferase class-I 79 265 IPR017926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01884 Accr-Chr10 43400447 43403735 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01884 K01658 - qsa:O6P43_026053 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01884 10 43400447 43403735 Accr10g01884 10 43400447 43403735 ECH