Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01860 ATGATGGCCCACGGGGAACATACTGATCAACCAGCATCTAATTGGACAATCCATGTTTCAGATGTAAGAACAGTCAAGGTTAGCAACATATCACTGGCAACTTCTGTGAAGGATATAAGAGATTTCTTTTCATTTTCGGGTGAAATTCAATATATCGAGATGCTAAGGGAAAGTGAGAGGACTCAGGCTTCATATGTTACCTTTAAGGAATCAAAGGAAGCAGACACAGCAGTGTTGTTGACGGGAGCCAGCATAGGTGATCACTGTGTCACCATCACACCCGTTGAGGACTACCAGCTGCCTCCTCATGTTCTTCCTTCAGGACCAGCGAAAAAGCCAACACATGCGGCAGTTAAGAAGGCTGAAGATGTGGTAAGCACCATGCTTGCCAAGGGTTTCATTGTAGGAAAAGATGCAATCAACAGGGCAAAATCCTTTGATGAACGCCATTGCTTGACTTCAAATGCTTCCGCCACAGTAGCTTCCATTGATCACAAAATGCGTTTAAGGGATAAACTAAGCGTTGGAACAGGCATACTGAATGAGATAGTGAAAGAGATGAATGACAAGCTTCTAATATCTGAAATGACCAAGTCTGCTTTTGCTGCTGCTGATAATGCTCGATCCGCTGTCGTGAGCAATCCTTACTTGTTAACTGGTGCCTCATGGCTGTCAAGTGCCTATACTGTTATTGCAAATGCAGTTGGAAATGTGAGCATGAGGACCAAAGAGAAGGTTGAAGAGGCTGATAAATTTGGGAGGACGCACTTAGATGGGGATCTTCCTGTGTTTTCTGCTCATTCAAGCAGAGTTCATAGTGGAGATCGCAACTGA 834 0.4412 MMAHGEHTDQPASNWTIHVSDVRTVKVSNISLATSVKDIRDFFSFSGEIQYIEMLRESERTQASYVTFKESKEADTAVLLTGASIGDHCVTITPVEDYQLPPHVLPSGPAKKPTHAAVKKAEDVVSTMLAKGFIVGKDAINRAKSFDERHCLTSNASATVASIDHKMRLRDKLSVGTGILNEIVKEMNDKLLISEMTKSAFAAADNARSAVVSNPYLLTGASWLSSAYTVIANAVGNVSMRTKEKVEEADKFGRTHLDGDLPVFSAHSSRVHSGDRN 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01860 277 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 23 97 IPR000504 GO:0003723
Accr10g01860 277 SMART rrm1_1 24 93 IPR000504 GO:0003723
Accr10g01860 277 SUPERFAMILY RNA-binding domain, RBD 9 99 IPR035979 GO:0003676
Accr10g01860 277 Gene3D - 19 93 IPR012677 -
Accr10g01860 277 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26 90 IPR000504 GO:0003723
Accr10g01860 277 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 23 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01860 Accr-Chr10 43091345 43094412 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01860 - - gmx:100819891 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01860 10 43091345 43094412 Accr10g01860 10 43091345 43094412 ECH