Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01838 ATGGCCGATGCTCTCACGGTAGCTCTCACGGTAATTCCTGCTGCTGTACTCCGCAACCTTGCTGACAAGCTCTATGAGAAGCGCAAGAATGCTGCTCTTGAGGTTGAGGGGCTTGTGAAGCAGCTCACTGCTGCTGCGGATCATGAAAAAATCACGGCAGTGATTAATTTGTTGATTACGGACTATACTTTCTCACCGCAAGCAAATCAACGGAAGGGAGGATTGATAGGACTAGCTGCCGCGACAGTTGGGTTGTCTAATGAAGCCTCTCAGCATCTTGAGCAAATTGTGCCTCCTGTAATAAAGTCTTTCGGCGATCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCACTATACAATATTGCTAAGGTTGTGAGAGGGGAATTTATTGTATTCTTTAACCAGATCTTTGATGCCCTATGCAAGCTTTCCGCTGACTCAGATGCCAATGTGCAAAGTGCTGCTCATCTCTTGGATCGGCTTGTGAAGGATATTGTGACTGAAAGCGATCAGTTTAGTATTGAAGAATTTATACCATTGTTGAGGGAGCGCATGAATGTCCTGAATCCATATGTTCGTCAGTTTCTGGTTGGATGGATTACTGTGTTGGACAGTGTCCCAGATATCGATATGCTGGGCTTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGCTGAGTGATTCTAGTCATGAAATTCGTCAGCAAGCAGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAGAACTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATACTGGTTGAGAGGGCAGGATCTCCAGATGAATTTACTAGATTAACAGCTATCACATGGATAAATGAGTTTGTCAAGCTTGGTGGAGATCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTCTGCCTTGCATATCTGATAAAGAAGAGAAAATTCGAGTGGTTGCTCGTGAAACCAATGAAGAACTACGGGCAATCAGGGCTGATCCAGCGGAAGCATTTGACATAGGAGCAATCCTGTCTGTTGCTAGGAGACAATTGTCAAGTGAATATGAAGCTACAAGAATTGAAGCTCTGCACTGGATATCAACTCTTTTAAACAGATATCGTGCTGAGGTTCTGACATTTCTGGATGACATATTTGACACCTTGCTGAAAGCACTTTCGGACTCATCCAATGAGGTTGTGCTTCTGGTTCTTGATGTTCATGCATGCATTGCAGAGGATCCTCAGCACTTTCGACAGCTTGTTGTTTTCCTAGTGCACAATTTCCGGGTAGATAATTCTCTTTTGGAGAGGCGTGGTGCTTTGATAATCCGTCGACTTTGTGTGCTCTTGAATGCTGAAAGAGTCTACCGTGAACTATCTACAATACTAGAAGCGGAATCTGATTTGGATTTTGCATCAGTTATGGTTCAGGCTTTGAATTTGATCTTGCTCACGTCGTTGGAGTTATCTGAGCTTCGAGATCTTTTAAAGGGATCACTGATAAATCCTGCTGGGAAAGATCTTTATGTTTCCTTGTATGCCTCATGGTGCCATTCTCCAATGGCAATTATTAGTCTCTGTTTATTAGCTCAGACATACCAACATGCAAGTGCTGTGATTCGATCTCTTGTAGAGGAGGACATTAATGTTAAATTTTTGGTTCAACTGGATAAGCTGGTTCGCTTGCTGGAAACTCCAATCTTTTCGTATCTTAGGTTGCAGCTTCTTGAACCTGGAAAACATGTATGGTTATTTAAAGCATTGTACGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTCAAGATACTGAAAACTCGTTTAAAAGCCGTGCCGTCATATTCTTTCAATGGTGAACAATTGAATAGAACATCATCTGGGGATCCTTACCATATTCTTCATCAAATGTCTGGGTCTCATGCTAATGAGGATGGTTTCGATGATGGGAAGTCACGTAATGGAATCAACTTTGCTGCAAGGCTGCAACAGTTTGAGAAAATGCAGTACCAGCATCGCATGCATGCTAAAGCACAAGCTCAGTTGCGCAATAATTCTGGATCATTGTCAAAGGAGGGTTCTCAATCACAGAGACAGGAAGAAGAACAGAGACGATCTCAGTCATCTGACCTTAATGCTCCTCCTTTAAGATCATCAAAGAAAGGCTCTGGGCAGCAGCAACTATAA 2187 0.4266 MADALTVALTVIPAAVLRNLADKLYEKRKNAALEVEGLVKQLTAAADHEKITAVINLLITDYTFSPQANQRKGGLIGLAAATVGLSNEASQHLEQIVPPVIKSFGDQDSRVRYYACEALYNIAKVVRGEFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVERAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAIRADPAEAFDIGAILSVARRQLSSEYEATRIEALHWISTLLNRYRAEVLTFLDDIFDTLLKALSDSSNEVVLLVLDVHACIAEDPQHFRQLVVFLVHNFRVDNSLLERRGALIIRRLCVLLNAERVYRELSTILEAESDLDFASVMVQALNLILLTSLELSELRDLLKGSLINPAGKDLYVSLYASWCHSPMAIISLCLLAQTYQHASAVIRSLVEEDINVKFLVQLDKLVRLLETPIFSYLRLQLLEPGKHVWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLNRTSSGDPYHILHQMSGSHANEDGFDDGKSRNGINFAARLQQFEKMQYQHRMHAKAQAQLRNNSGSLSKEGSQSQRQEEEQRRSQSSDLNAPPLRSSKKGSGQQQL 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01838 728 Pfam Vacuolar protein 14 C-terminal Fig4p binding 433 612 IPR021841 -
Accr10g01838 728 FunFam protein VAC14 homolog isoform X1 253 414 - -
Accr10g01838 728 ProSiteProfiles HEAT repeat profile. 96 131 IPR021133 -
Accr10g01838 728 MobiDBLite consensus disorder prediction 708 728 - -
Accr10g01838 728 Gene3D - 6 254 IPR011989 -
Accr10g01838 728 MobiDBLite consensus disorder prediction 678 694 - -
Accr10g01838 728 FunFam ARM repeat superfamily protein 9 129 - -
Accr10g01838 728 FunFam protein VAC14 homolog 130 252 - -
Accr10g01838 728 PANTHER TAX1 BINDING PROTEIN-RELATED 11 694 IPR026825 GO:0006661|GO:0070772
Accr10g01838 728 MobiDBLite consensus disorder prediction 669 728 - -
Accr10g01838 728 SUPERFAMILY ARM repeat 12 539 IPR016024 -
Accr10g01838 728 Pfam Vacuolar 14 Fab1-binding region 69 165 - -
Accr10g01838 728 Gene3D - 255 483 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01838 Accr-Chr10 42870683 42878168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01838 K15305 - tcc:18609872 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01838 10 42870683 42878168 Accr10g01838 10 42870683 42878168 ECH