Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01795 ATGGGTACGCTTCAGACTTGGAGAAAAGCTTATGGTGCCCTCAAAGATTCTACCAAAGTTGGTCTTGCCCATGTCAACAGCGATTACGCGGATTTGGAGGTGGCCATAGTCAAAGCCACGAACCACGTTGAATGCCCTCCCAAGGAGAGACACCTTAAAAAAATTCTACTTGCCACGACTGCTGTTCGACCCCGAGCTGATGTTGCTTACTGCATTCATGCACTGGCCCGTCGATTGTCCAAGACACGAAATTGGACGGTGGCACTAAAAACATTGATAGTCATCCATAGGCTATTAAGAGAGAGTGATCCTACTTTTAAAGAAGAATTTCTTAATTTCTCACAAAGAGGACACATTCTCCAACTTTCTAATTTTAAGGATGATTCTAGCCCAATTGCTTGGGATTGCTCTGCTTGGGTACGCACTTATGCATTGTTTTTGGAAGAGAAGCTTGAATGTTTTCGGATTTTGAAGTATGATATTGAAGCTGAACGTCTTCCCAAGCCTGCCCAAGGGCTGGAGAAGGGTTACGGCAGGACAAGAGATCTGGAAAGTGAAGAACTATTGGAGCAGTTGCCTGCTTTGCAGCAGCTTCTCCATCGGCTTATTGGTTGCAGGCCAGAAGTAGCAGCTGTCAGCAATTATGTGATACAATATGCTCTAGCTCTGGTACTGAAAGAGAGCTTTAAGATTTATTGTGCTGTTAATGATGGAATCATCAATCTTGTTGATAAGTTTTTTGAGATGCCAAGACATGAAGCTATCAAAGCCCTTGATATCTACAGACGTGCTGGCCAGCAGGCAGCAAATTTATCTGACTTCTATGAAGTATGCAAAGGTTTACAACTTGCTCGGAATTTTCAGTTTCCTGTCCTAAGAGAGCCTCCTCAATCTTTTCTTGCGACCATGGATGAGTACATAAGAGAGGCACCACGAGTGGTGACTGTGCCAACTGAGCCATTGCTTCAGTTGACATATAGACCAGAGGAAGAAGTTCCTGCAATTGAAGACAGTAAAGTATCTGTTGAAGAGGAGGAGCCGTCAGTACCTGCAGATGATGTTGTCTCCCATTCTGAGATTGTTCACCCTCCTCCGCTTCCATCTCAAAACAATTTTGACACTGGAGACTTACTGGGTTTGAATGACACTGTACTTGATGCATCATCAATAGAGGAAAGCAATGCTCTTTCCCTAGCCATAGTACCTTCTGAAAATGGCACAACATCTGGTTTTGAATCTAGTACCGCTCGAGCAAAAGATTTTGATCCAACTGGATGGGAGCTTGCTTTGGTTTCCACTCCGAGTAGCAATATTTCTTCAGTCAATGAAAGACAATTAGCTGGCGGAATGGACTCGCTTACTCTTAACAGCTTATACGATGAAGCAGCATATAGAGCACAGCAGCCAGTGTATGGTGCACCAGCTCCAAATCCATTTGAGGTTCAAGATCCATTTTCTTTCTCAAGCAGCATCCCTCCCCCTACTGCTGTCCAAATGGCAGCGATGTCTCAGCAGCAAACAAATCCATTTGGTCCATTCCAACCTTTTCAGCCTCAGCCGCAGCCTCAGCAGCAGCATCTATTAATGAGCGCCACAAATCCTTTTGGGGATGCAGGATTTGGGGCGTTTCCTGTGAATCCTGTTTCTCATTCACAAAACAACAACAATCCATTTGGTAACCCTGGCTTGCTATGA 1695 0.4454 MGTLQTWRKAYGALKDSTKVGLAHVNSDYADLEVAIVKATNHVECPPKERHLKKILLATTAVRPRADVAYCIHALARRLSKTRNWTVALKTLIVIHRLLRESDPTFKEEFLNFSQRGHILQLSNFKDDSSPIAWDCSAWVRTYALFLEEKLECFRILKYDIEAERLPKPAQGLEKGYGRTRDLESEELLEQLPALQQLLHRLIGCRPEVAAVSNYVIQYALALVLKESFKIYCAVNDGIINLVDKFFEMPRHEAIKALDIYRRAGQQAANLSDFYEVCKGLQLARNFQFPVLREPPQSFLATMDEYIREAPRVVTVPTEPLLQLTYRPEEEVPAIEDSKVSVEEEEPSVPADDVVSHSEIVHPPPLPSQNNFDTGDLLGLNDTVLDASSIEESNALSLAIVPSENGTTSGFESSTARAKDFDPTGWELALVSTPSSNISSVNERQLAGGMDSLTLNSLYDEAAYRAQQPVYGAPAPNPFEVQDPFSFSSSIPPPTAVQMAAMSQQQTNPFGPFQPFQPQPQPQQQHLLMSATNPFGDAGFGAFPVNPVSHSQNNNNPFGNPGLL 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01795 564 MobiDBLite consensus disorder prediction 498 523 - -
Accr10g01795 564 FunFam Putative clathrin assembly protein 173 321 - -
Accr10g01795 564 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Accr10g01795 564 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Accr10g01795 564 MobiDBLite consensus disorder prediction 540 564 - -
Accr10g01795 564 MobiDBLite consensus disorder prediction 546 564 - -
Accr10g01795 564 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 505 IPR045192 GO:0048268|GO:0072583
Accr10g01795 564 SMART enth_2 30 161 IPR013809 -
Accr10g01795 564 MobiDBLite consensus disorder prediction 498 512 - -
Accr10g01795 564 SUPERFAMILY GAT-like domain 178 309 - -
Accr10g01795 564 Gene3D - 7 161 IPR008942 -
Accr10g01795 564 Gene3D ANTH domain 174 324 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Accr10g01795 564 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Accr10g01795 564 CDD ANTH_N 32 154 - -
Accr10g01795 564 FunFam Clathrin assembly protein AP180 6 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01795 Accr-Chr10 42256507 42261140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01795 - - gmx:100794160 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01795 10 42256507 42261140 Accr10g01795 10 42256507 42261140 ECH