LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr10g01601	ATGGCTGCTTTGGTTCCAACACGATTCCCGCTCTCTCCTGCTTCACCACTTCGATTTTATCATTTGCGAAAGCCTAAGCCTCCCTTCCTTCTTATCACCTGCTCCAGGAAAACGCTATTTCGGTTTAGTGGCACAAATGTATTCTCCGCTTGCCGGAATGTGATAACTCTGTCGCCGGCAGCTACTGGTGACGATGAGCATCTGGCGTGTTCAAGAAATCCTCTCAACTTACCTCAGATCTTCTTGCGCCTCGCTGTCTCTGTGGTGCTGTTTATTGGATTTGGATTTTGCATCGGCATTCGTGTTAGTTCGGCTTCTTCGACGGCTCTTCCCGCGTCTTCTTCGTCGCTTCAAGATAAGCAGACAACGGAAGATGAACATGAAGGAAGAAAACAAGATGATGACACAGAAAATGTTCTTGATGGGGATTTAGAAGCAGCTTTTAATGCTTGGAAATCTAAAACATATGCATTGACTGTGCCTCTCAAAATTGTTGCTCTACGTGGTTCTGTGCCTCCATCATGGATCAAGGACTTCATAAAATCTCAAGGGAGAAGGCTGAAGTTTAACGTGAAGTATAATACAAGTCTTGAGAGTATTTTCTCTGATCTGTCAATTCCCTTCACTAAAGGAAATATTGGGCCTGCTTCTGCTTTGGCGGCTGATATTGTTAGTATTGGTGACTCCTGGCTTAAATTTGCCATCAAAAAAGCTATAATTGAGCCAATACGTGATGTTGAAGACCAGGATTGGTTTAAAGGCCTAGATGAGAAATGGAAGGTATACCTGCGCAGGAATAGTGAGGGAGAAATAGATCCTTACGGTGACATATGGGCTGCTCCATATCGATGGGGCTGCATGGTTATAGCCTACAAGAAAAACAAATTTCAAAAGTATAATTTGACTCCTATAGAGGACTGGGCAGATTTGTGGCGGCCAGAGCTTGCAGGAAGAATCTCAATGGTTGATTCCCCCAGAGAGGTTATTGGTGCAGTTTTGAAGTATATGGGAGCCTCATACAATATAAACAACATTGATTTGCAAGTTGATGGTGGGAGAGATGCTGTTAAGCACAATTTAGCCTTGCTTGGAAAGCAGGTTCGACTGTTTGACAGTGTTCACTATCTGAAAGCTTTTGGAGTTGGAGATGTGTGGGTTACTGTTGGATGGAGTAGCGACATCATTCCTATCGCCAAGCGCATGTCTAATGTAACAGTAATTGTTCCAAAATCTGGAGCTAGCTTATGGGCAGATCTTTGGGCAATTCCAGCTGCTTCTCGGCTTGAAACAAACCGGATTGGCAGCCGAGTCTGGGGACCATCACCACTAATCTATCAGTGGATAGAGTTCTGTCTGCAAGCTGCAAGAGCATTGCCCTTTAAACAAGAGGTTGTTCCAGGGGCCTCTCCCATTACTCTTCAAGCTCCTTCAGCCAGTGTTCCCACTGAGCTCTCAAAGGGTAAGCCAAGACTAGATACCAATCTCATTGCTGGAGCCCCACCAACTGAAATACTAGATCAGTGTGAGTTTCTTGAGCCATTGTCTGATTCAACGATATCAGATTACCGCTGGTTGCTTGCAGCCATCCAAGAACCGAACCGTGGATGGGTACATAAAGCGCGTGAGTATATTTCATCGATGATTAAATTTTCTGGAAAATCTGATCCAAAACTAGCTTGA	1680	0.4446	MAALVPTRFPLSPASPLRFYHLRKPKPPFLLITCSRKTLFRFSGTNVFSACRNVITLSPAATGDDEHLACSRNPLNLPQIFLRLAVSVVLFIGFGFCIGIRVSSASSTALPASSSSLQDKQTTEDEHEGRKQDDDTENVLDGDLEAAFNAWKSKTYALTVPLKIVALRGSVPPSWIKDFIKSQGRRLKFNVKYNTSLESIFSDLSIPFTKGNIGPASALAADIVSIGDSWLKFAIKKAIIEPIRDVEDQDWFKGLDEKWKVYLRRNSEGEIDPYGDIWAAPYRWGCMVIAYKKNKFQKYNLTPIEDWADLWRPELAGRISMVDSPREVIGAVLKYMGASYNINNIDLQVDGGRDAVKHNLALLGKQVRLFDSVHYLKAFGVGDVWVTVGWSSDIIPIAKRMSNVTVIVPKSGASLWADLWAIPAASRLETNRIGSRVWGPSPLIYQWIEFCLQAARALPFKQEVVPGASPITLQAPSASVPTELSKGKPRLDTNLIAGAPPTEILDQCEFLEPLSDSTISDYRWLLAAIQEPNRGWVHKAREYISSMIKFSGKSDPKLA	559

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr10g01601	559	CDD	PBP2_PotD_PotF_like_1	161	528	-	-
	Accr10g01601	559	Pfam	Bacterial extracellular solute-binding protein	221	457	-	-
	Accr10g01601	559	MobiDBLite	consensus disorder prediction	111	137	-	-
	Accr10g01601	559	SUPERFAMILY	Periplasmic binding protein-like II	162	427	-	-
	Accr10g01601	559	PANTHER	SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN	82	529	-	-
	Accr10g01601	559	Gene3D	-	285	440	-	-
	Accr10g01601	559	MobiDBLite	consensus disorder prediction	120	137	-	-
	Accr10g01601	559	PRINTS	Bacterial periplasmic spermidine/putrescine-binding protein signature	409	428	IPR001188	GO:0015846\|GO:0019808\|GO:0042597
	Accr10g01601	559	PRINTS	Bacterial periplasmic spermidine/putrescine-binding protein signature	305	319	IPR001188	GO:0015846\|GO:0019808\|GO:0042597
	Accr10g01601	559	PRINTS	Bacterial periplasmic spermidine/putrescine-binding protein signature	323	342	IPR001188	GO:0015846\|GO:0019808\|GO:0042597
	Accr10g01601	559	PRINTS	Bacterial periplasmic spermidine/putrescine-binding protein signature	276	292	IPR001188	GO:0015846\|GO:0019808\|GO:0042597

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr10g01601	Accr-Chr10	39918794	39922622	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr10g01601	-		-	aprc:113857970	764.992

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Accr10g01601	10	39918794	39922622	Accr10g01601	10	39918794	39922622	ECH