Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01421 ATGAAGTTCATGAAACTAGGGTCTCGTCCAGATACCTTCTACACTGCAGAAGCTGTAAGGTCAGTCTCTTCTGATGTTTCCAGCGACCTCATAATTCAAGTGCAAGAAAGTAGTTATCTTCTTCATAAGTTTCCCCTGCTGTCTAAATGCCTGCGCCTACAAAGGTTATGCTCAGAATCACCAGGTTCTTCTCCTCACCAGATAGTTCAACTCCCTGATTGTCCTGGTGGAGTAGAGGCATTTGAATTGTGTGCTAAGTTCTGTTATGGTATTACCATAACTCTTAGTGCTTACAACATTGTAGCTGCTCGATGTGCTGCTGAATATTTACAGATGACAGAAGAAGTGGAGAAAGGAAACTTAATATATAAGCTTGAGGTTTTCTTCAATTCTTGTATTCTTCATGGTTGGAAGGATTCTATCATGACCCTACAAAGCACCAAAGCTTTGCCTTTATGGTCTGAGGACTTAGCAATTACAAGCAGATGCATTGAAGCTATTGCCTCTAAGGTTTGGAGTCACCCCTCAAAGGTAAGTTTGTCTCACAGTCATTCTCGAAGGGTAAGGGACGATGTTTCGTGCAATGGAAACGAAAGTCAGAGGCATAAATCAGATAGTAAAGGATGGTGGGCTGAGGATTTAGCAGAATTGAGCATAGACCTCTATTGGAGGACCATGATAGCAATCAAATCTGGCTGCAAGATGCCTTCAAATATCATAGGAGAAGCATTGAAAGTTTATGCTTCTCGTTGGCTTCCTAATATCTCAAGAAAATCACATCCCAATAGGAAAGTTGCTGCTTCTGACTCTGATTCAGACTCTGCAAGTGAGATAACCTCAAAGCACCGTTTGCTTTTGGAATCAATAGCAAGCTTGCTTCCAGCAGAGAAAGGGGCTGTATCTTGTAGTTTCCTTCTTAAACTCTTGAAAGCAGCCACTATTCTAAATGCTTCTTCTTCTTCAAAAATGGAGTTAGCTAGAAGAGTGGGACTTCAATTGGAGGAAGCTACTGTGAACGATCTTTTAATACCTTCACTGTCTTACACCAATGATATGCTGTATGATGTTGAGTTGGTGATGACCATATTGGAACAATTTATGTTACAAGGTCAGAGTCCTCCAACTAGCCCACCAAGATCCAGGCTGGCAGTTGAAAGACGAAGGTCACGTTCAGCTGAAAATATTGATTTTGAATTCCAAGAGAGTAGAAGGTCATCTTCAGCATCTCATAGCTCAAAGTTGAAGGTGGCAAAGCTAGTCGATAGGTATCTACAAGAGGTTTCCAAGGATGTGAATTTGCCTATGTCTAAGTTCATTGCTCTTGCTGAAGCTATACCAGATTTTGCCAGACATGATCATGATGATCTCTACAAAGCCATTGACATTTATCTCAAGGCTCATCCAGAACTCAACAAAAGCGAAAGAAAAAGGCTATGTAGAATCCTTGACTGCAAAAAACTGTCCATGGAAGCTTGCATGCATGCCGCACAGAACGAACTTCTTCCCCTAAGGGTCGTAGTTCAAGTACTCTTCTTCGAGCAAGCGAGAGCTGCAGCAGCTGGTAACCAAGTGACAGACTTACCAAGCAATCTCAGGGCACTACTTACTACACATGGATTTGACCCATTAAAACACACTGGTCCATTGAGCACAACCACAAGCATACATGCAGATGATCAATGGAGTGTTTCTGGCCTCAAGTCACCTAAGTCTAGGAGTTCAACTCTAAGGATGAAGCTTGCTGAGGATGATGACTTGGATGAACATGGTGGTGTTAATCGCAATGGAACTGAGAGAAATCCTAAGCTCAAGGCTATTCGTGGTCTTCCAAATCAACCCAAAAGGATGTTTAGTAAGTTGTGGCCCACCAGTAGAGGCACTAGTGAAAAGAACTGA 1896 0.4219 MKFMKLGSRPDTFYTAEAVRSVSSDVSSDLIIQVQESSYLLHKFPLLSKCLRLQRLCSESPGSSPHQIVQLPDCPGGVEAFELCAKFCYGITITLSAYNIVAARCAAEYLQMTEEVEKGNLIYKLEVFFNSCILHGWKDSIMTLQSTKALPLWSEDLAITSRCIEAIASKVWSHPSKVSLSHSHSRRVRDDVSCNGNESQRHKSDSKGWWAEDLAELSIDLYWRTMIAIKSGCKMPSNIIGEALKVYASRWLPNISRKSHPNRKVAASDSDSDSASEITSKHRLLLESIASLLPAEKGAVSCSFLLKLLKAATILNASSSSKMELARRVGLQLEEATVNDLLIPSLSYTNDMLYDVELVMTILEQFMLQGQSPPTSPPRSRLAVERRRSRSAENIDFEFQESRRSSSASHSSKLKVAKLVDRYLQEVSKDVNLPMSKFIALAEAIPDFARHDHDDLYKAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAAAGNQVTDLPSNLRALLTTHGFDPLKHTGPLSTTTSIHADDQWSVSGLKSPKSRSSTLRMKLAEDDDLDEHGGVNRNGTERNPKLKAIRGLPNQPKRMFSKLWPTSRGTSEKN 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01421 631 MobiDBLite consensus disorder prediction 581 631 - -
Accr10g01421 631 ProSiteProfiles NPH3 domain profile. 208 516 IPR027356 -
Accr10g01421 631 SUPERFAMILY POZ domain 21 116 IPR011333 -
Accr10g01421 631 Gene3D Potassium Channel Kv1.1; Chain A 16 118 IPR011333 -
Accr10g01421 631 Pfam NPH3 family 209 492 IPR027356 -
Accr10g01421 631 MobiDBLite consensus disorder prediction 617 631 - -
Accr10g01421 631 MobiDBLite consensus disorder prediction 581 595 - -
Accr10g01421 631 PANTHER OS12G0117600 PROTEIN 23 568 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01421 Accr-Chr10 37490816 37493306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01421 24 522 EF-hand Containing Proteins AT3G44820 35.441 2.11e-92 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01421 - - cave:132178768 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01421 10 37490816 37493306 Accr10g01421 10 37490816 37493306 ECH