LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr10g01376	ATGGTGATTGTAGCATCACTGCCTGGACGCAACCTCTTCTCGTCCTTACCTTCGACGCCACCACCCTCCAACCCCGCCGTCAACCCCGCCACTCCATCCCCTCCGATCCCAATTCCCAAATACCCACCTCCTCGCAGATCCCTCAAGTCCCAAAAACCCCCTCCTGAACCCCCAAAACCCACTTCGAATCCTGGCCTGAAGCACCATCGAAATTCCAAATACTACAAACCCGTTAAAGATGGCGTTATTAAATCGGACGGCGATCGCTCTGTCATCATTGGCGAGTCTGGAGTGTCCTACCTTCTTCCCGGAGCTCCGTTCGAATTCCAGTTTAGTTATTCCGAGACGCCGAAGGTAAAGCCGCTGGCGATTCGGGAGCCGGCGTTCTTGCCGTTCGCGCCGCCCACAATGCCGAGGCCTTGGACTGGTAAAGCGCCATTGAAGAGCTCGAAGAAGAAAATCCCACTCTTCGATTCTTTCAATCCTCCCCCGCCGGGAACGAAAGGAGTGAAGCATGTTGAAATGCCAGGGCCGTTTCCTGCTGGGAAGTATCCACAGGAGGGGAAGACGAGGGAGGAGATACTTGGGGAGCCATTGAAGAGGTGGGAAATAAGAATGCTTGTTAAACCCATGTTGGGGGAAAATCGCCAGGTTAATCTCGGAAGGGATGGATTAACACATAACATGTTGGAGTTAATACATTCACATTGGAAGCGATCCCGTGTTTGTAAAGTTCGTTGCAAAGGTGTCCCAACCGTAGATATGGATAACGTCTGCTATTATCTTGAGGAGAAAACTGGGGGTAAAATAATCCATCGAGTTGGTGGTGTGGTTTATCTTTTCCGTGGGAGAAATTATAACTATCGTACTCGTCCACAGTATCCATTGATGCTCTGGAAGCCAGCTGCTCCGGTTTACCCAAAACTTATCCAAGAAGCTCCGGAAGGCTTAACAAAAGCTGAAGCTGACAAATTCCGTAAGAAAGGAAAAAAGCTATTGCCGATATGTAAATTACCAAAAAATGGAGTCTATGTTTCCCTTGTGAAAGATGTAAGACATGCTTTTGAAGGAAGTCCTTTGGCGAAAATTGACTGCAAGGGATTGGAACCCAGTGATTACAAGAAAATAGGAGCCAAGCTTAAGGAATTGGTTCCTTGTGTGCTGTTGTCATTTGATGATGAACAGATACTAATGTGGAGAGGGAAAGATTGGAAATCAATGTATCCTCAAGCTCCTCCAGTTGTAAGCTTTCCCGAAGTTGGTATTGCAAGGAACTTAGACAATTCAGGTGAGACTGAGGATGATCAAAATAAGCATGACAGAAACATAATGCCATCGAGCCCGAAAATGACATCCCTTTGGAAGCATGCGTTAGAGTCGAGCAAAGCGCTGTTGTTGGATGAGATTATTGTCGATCCTGATGCTCTCTTGGAGAAGGTGGAGGAATTTGAGGTTGCTTCACAGGCCACTGAACACTCCTCCCCGGCACTCGTATTTTCCAGTGAAGATGGTGACGCTGCTGCTGCTAAGGGCTCACTTGCGGACTTTGAAGAAGACAACACTTATCCTAGTGATGGCTTGCCTACTGAGGATGACGACGACGAAGATTATCTGTATGACAACGGTGATGAGTATGACGATGTGGATGAATTGAATGCTGTGGGGGGTTCATCAGCCCCACCTGGATCATTACCTGTTGATAGAATTGCTGACGAGCTCAGAATAAGACAGGACAAATAA	1740	0.4759	MVIVASLPGRNLFSSLPSTPPPSNPAVNPATPSPPIPIPKYPPPRRSLKSQKPPPEPPKPTSNPGLKHHRNSKYYKPVKDGVIKSDGDRSVIIGESGVSYLLPGAPFEFQFSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKHVEMPGPFPAGKYPQEGKTREEILGEPLKRWEIRMLVKPMLGENRQVNLGRDGLTHNMLELIHSHWKRSRVCKVRCKGVPTVDMDNVCYYLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKAEADKFRKKGKKLLPICKLPKNGVYVSLVKDVRHAFEGSPLAKIDCKGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPQAPPVVSFPEVGIARNLDNSGETEDDQNKHDRNIMPSSPKMTSLWKHALESSKALLLDEIIVDPDALLEKVEEFEVASQATEHSSPALVFSSEDGDAAAAKGSLADFEEDNTYPSDGLPTEDDDDEDYLYDNGDEYDDVDELNAVGGSSAPPGSLPVDRIADELRIRQDK	579

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr10g01376	579	SMART	CRS1_YhbY_2	199	282	IPR001890	GO:0003723
	Accr10g01376	579	SMART	CRS1_YhbY_2	317	400	IPR001890	GO:0003723
	Accr10g01376	579	MobiDBLite	consensus disorder prediction	18	62	-	-
	Accr10g01376	579	FunFam	CRS2-associated factor 1, chloroplastic	198	293	-	-
	Accr10g01376	579	MobiDBLite	consensus disorder prediction	1	81	-	-
	Accr10g01376	579	MobiDBLite	consensus disorder prediction	524	550	-	-
	Accr10g01376	579	Gene3D	-	317	411	IPR035920	-
	Accr10g01376	579	FunFam	CRS2-associated factor 1, chloroplastic	316	411	-	-
	Accr10g01376	579	ProSiteProfiles	CRM domain profile.	197	293	IPR001890	GO:0003723
	Accr10g01376	579	MobiDBLite	consensus disorder prediction	428	442	-	-
	Accr10g01376	579	MobiDBLite	consensus disorder prediction	425	447	-	-
	Accr10g01376	579	ProSiteProfiles	CRM domain profile.	315	411	IPR001890	GO:0003723
	Accr10g01376	579	MobiDBLite	consensus disorder prediction	509	579	-	-
	Accr10g01376	579	PANTHER	CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC	52	573	IPR044599	GO:0000373
	Accr10g01376	579	SUPERFAMILY	YhbY-like	198	292	IPR035920	-
	Accr10g01376	579	Pfam	CRS1 / YhbY (CRM) domain	202	282	IPR001890	GO:0003723
	Accr10g01376	579	Pfam	CRS1 / YhbY (CRM) domain	317	400	IPR001890	GO:0003723
	Accr10g01376	579	SUPERFAMILY	YhbY-like	317	408	IPR035920	-
	Accr10g01376	579	Gene3D	-	198	294	IPR035920	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr10g01376	Accr-Chr10	36882525	36886063	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr10g01376	-		-	qsa:O6P43_025275	835.484

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Accr10g01376	10	36882525	36886063	Accr10g01376	10	36882525	36886063	ECH