LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr10g01353	ATGGCGACATCCATTAAAAAGTGCATGATGCTGTGCTGTATCGGCCATACCGTGTCGAAGGAAGATATGGCTGGGCAGTCATACGAGGAAGCCATTGCAGAGCTGAACAAGCTTCTCAGGAAGAATCCAGATTTGTTTGGGAAACTTGCCGAAGCCCAGAGCCCGAAGTTTTTGGTATTTGCATGCTCAGACTCAAGAGTTTGCCCCTCGCATGTGCTGAATTTCCAACCGGGAGAGGCTTTTGTGGTGCGGAACATAGCCAGCATGATCCCACCTTATGACCAGACGAAATATTCAGGAACTGGGGCAGCCATTGAATATGCAGTGGTGCATTTAAAGGTGGAGAATATAATGGTGATTGGACATAGCTGTTGTGGGGGTATTAAAGGGCTCATGTCTATCCCAGATGATGGGACCACTTCAAGTGAATTCATCGAGAGCTGGGTGCAAATTTGTAATCCAGCAAAGTCCAAGGTTAAGGCAGACACAAAAGGCCAGAGTTTCTCGGAGCTGTGTACTAACTGCGAGAAGGAAGCAGTGAATGTGTCGCTTGGAAATCTGCTGACTTATCCATTTGTGAGGGATGCAGTTGCGAAGAAAACACTGGCATTGAAAGGTGCTCATTACGATTTTGTTAACGGCAGCTTTGACCTCTGGGATCTCGACCTCAAAATTTCACCTCTTCCTCTTTGA	693	0.469	MATSIKKCMMLCCIGHTVSKEDMAGQSYEEAIAELNKLLRKNPDLFGKLAEAQSPKFLVFACSDSRVCPSHVLNFQPGEAFVVRNIASMIPPYDQTKYSGTGAAIEYAVVHLKVENIMVIGHSCCGGIKGLMSIPDDGTTSSEFIESWVQICNPAKSKVKADTKGQSFSELCTNCEKEAVNVSLGNLLTYPFVRDAVAKKTLALKGAHYDFVNGSFDLWDLDLKISPLPL	230

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr10g01353	230	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 2.	106	126	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Accr10g01353	230	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 1.	62	69	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Accr10g01353	230	SMART	Pro_CA_2	50	220	IPR001765	GO:0004089\|GO:0008270
	Accr10g01353	230	PANTHER	CARBONIC ANHYDRASE	38	222	IPR001765	GO:0004089\|GO:0008270
	Accr10g01353	230	FunFam	Carbonic anhydrase	20	227	-	-
	Accr10g01353	230	Pfam	Carbonic anhydrase	58	215	IPR001765	GO:0004089\|GO:0008270
	Accr10g01353	230	SUPERFAMILY	beta-carbonic anhydrase, cab	37	224	IPR036874	GO:0004089\|GO:0008270
	Accr10g01353	230	CDD	beta_CA_cladeB	36	219	IPR045066	GO:0004089\|GO:0008270
	Accr10g01353	230	Gene3D	Carbonic anhydrase	26	228	IPR036874	GO:0004089\|GO:0008270

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr10g01353	Accr-Chr10	36693220	36700708	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr10g01353	K01673		-	gmx:100803945	366.696

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Accr9g01264	9	16588292	16593034	Accr10g01353	10	36693220	36700708	CCT