Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01341 ATGGCATTTTTGCCGCAAAAATTTCTATTCTCAGCTTTAGTTTCAATCCTCTGCTTTGCCTTTGAGGTTTCTTCATATAGAAGGGTTTATACACCTCCAAATGTCACACCTTTGACTAGTTCTTTTCCTCGTGTTCCAATTGATCGTGGGTTTTCTAAGTCCTTTGGGGCCTCAAATATTCAGTATCTCAATAATGGGTCCATGGCCACTCTGGCTCTTAACAAAACTTCAGGCTCTGGTTTGGTCTCACAAGGCAGATACTACTATGGATTCTTCAGTTCAGCCATCAAACTACCTGCTGGTCTTTCATCTGGTGTTGTAGTAGCCTTCTATTTGTCAAATGCAGATAAGTTCCCTCACAACCATGATGAGATTGATATTGAGCTTCTGGGACATGACAGGAGAAACGATTGGGTTATTCAAACCAATTTGTATTCAAATGGAAGTGTAAGCACCGGAAGAGAAGAGAAGTTCTATCTCTGGTTTGACCCCGCAAAGGAGCACCATTACTACAGTATCTTATGGAACAGCTATCACACAGTGTTTTTAGTGGACAATATTCCAGTGAGAGAGTTCATCCACAGCAATTCATATCCATCTATATTCCCATCAAAGCCAATGTCAGTTTATGCAACAATATGGGACGCATCAGATTGGGCAACACATGGAGGAAAATCCCCAGTGAATTATAATTATGCTCCATTTGTTGCTTCTTTCACTGAAATGGAATTAAGTGGTTGTGTGGTTTCAGATCCTTCAGAAACATCATCATCTTCTTCTTCTTCTACTACTACTACATGCTCAAAATCTTCTTCAAGTACTTCAGGCTTGGACCCTGCAAATGGACCTGAGTTCTCTAAGCTGTCTCAACAGCAGATTGCAGCCATGGATTGGGCAAGAAGAAAACTCATGTTTTACTCTTACTGTAATGATAAACCCAGGTACAAAGTCATGCCTCCAGAATGCCACTGA 972 0.4084 MAFLPQKFLFSALVSILCFAFEVSSYRRVYTPPNVTPLTSSFPRVPIDRGFSKSFGASNIQYLNNGSMATLALNKTSGSGLVSQGRYYYGFFSSAIKLPAGLSSGVVVAFYLSNADKFPHNHDEIDIELLGHDRRNDWVIQTNLYSNGSVSTGREEKFYLWFDPAKEHHYYSILWNSYHTVFLVDNIPVREFIHSNSYPSIFPSKPMSVYATIWDASDWATHGGKSPVNYNYAPFVASFTEMELSGCVVSDPSETSSSSSSSTTTTCSKSSSSTSGLDPANGPEFSKLSQQQIAAMDWARRKLMFYSYCNDKPRYKVMPPECH 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01341 323 PIRSF EndGlu_transf 10 323 IPR016455 GO:0010411|GO:0016762|GO:0042546
Accr10g01341 323 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 286 322 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Accr10g01341 323 Gene3D - 30 322 - -
Accr10g01341 323 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 47 322 IPR044791 GO:0004553
Accr10g01341 323 Pfam Glycosyl hydrolases family 16 51 231 IPR000757 GO:0004553|GO:0005975
Accr10g01341 323 SUPERFAMILY Concanavalin A-like lectins/glucanases 52 322 IPR013320 -
Accr10g01341 323 MobiDBLite consensus disorder prediction 253 284 - -
Accr10g01341 323 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 1 239 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01341 Accr-Chr10 36562623 36563984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01341 11 323 Glycoside Hydrolase AT1G10550 61.342 1.70e-144 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01341 K08235 - gmx:100778993 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01341 10 36562623 36563984 Accr10g01341 10 36562623 36563984 ECH