Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01289 ATGGCTCTCTCTCGCTTCGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCGTCTAGATTCAATCTTCTCAGACTCACCCCTTTTGCATTCTCCTCCACCCCTTCTCTCCGCCGCTCGCTTTCCTCTTCCGCCGATGACTCCTCCACCCTCACCATTGAGACCTCTCTTCCATTCAGCGCCCACAATTGCGACACCCCTTCGCGCTCCGTCGACACCACTCCCAAGGAACTCATGTCCTTCTTCCGCGACATGGCCCTCATGCGACGGATGGAGATTGCCGCGGATTCCCTCTATAAGTCTAAGCTCATCCGAGGGTTCTGTCATTTGTATGATGGCCAGGAGGCTGTGGCCATCGGCATGGAGGCTGCCACTACCAGGAAGGATTGCATAATAACATCTTACCGTGATCATTGTACCTTCCTGGCCCGCGGTGGAACCCTGTTGGAGGTGTTTGCGGAGCTCATGGGTCGTAAAGATGGATGCGCGAATGGAAAGGGTGGCTCTATGCACTTCTACAGGAAGGAAGCTGGGTTCTATGGCGGTCACGGGATCGTTGGGGCTCAGATTCCGCTTGGATGTGGATTAGCTTTTGCTCAGAAGTACTCTAAGACTGAAAATGTCACCTTCGCCATGTACGGTGATGGTGCGGCAAATCAGGGGCAGTTGTTCGAGGCGCTAAACATAGCCGCGCTTTGGGATCTCCCTGCAATTTTGGTCTGCGAGAATAATCATTACGGGATGGGGACGGCAGAATGGAGAGCTTCTAAGAGTCCTGCTTATTACAAGCGTGGGGACTATGTTGCTGGGTTGAAGGTAGATGGCATGGATGTTCTTGCTGTAAAACAGGCATGTACATTTGCAAAGGAGTATGCTTTGAAGAATGGGCCCATTGTTCTTGAATTGGACACCTACAGGTACCATGGCCATTCCATGTCAGATCCTGGTAGCACATATCGTACCCGTGATGAGGTTTCTGGCGTGAGACAGGAGCGTGATCCAATTGAGAGAGTGAGGAAGCTGTTATTGAAACACGAGATTGCAGCTGAAAAGGAACTAAAGGACTTTGAAAAGGAAGTCAAAAAAGAAGTTGATGAAGCTATAGCTAAAGCAAAGGAGAGTTCATTGCCGGAGCCATCTGAATTATTTACCAATATATACGTTAATGGTTTAGGGACTGAGTCATTTGGGGCTGACAGAAAGGAAGTAAGAGTTACTTTGCCATGA 1224 0.4951 MALSRFASSSSSSSSSASRFNLLRLTPFAFSSTPSLRRSLSSSADDSSTLTIETSLPFSAHNCDTPSRSVDTTPKELMSFFRDMALMRRMEIAADSLYKSKLIRGFCHLYDGQEAVAIGMEAATTRKDCIITSYRDHCTFLARGGTLLEVFAELMGRKDGCANGKGGSMHFYRKEAGFYGGHGIVGAQIPLGCGLAFAQKYSKTENVTFAMYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRASKSPAYYKRGDYVAGLKVDGMDVLAVKQACTFAKEYALKNGPIVLELDTYRYHGHSMSDPGSTYRTRDEVSGVRQERDPIERVRKLLLKHEIAAEKELKDFEKEVKKEVDEAIAKAKESSLPEPSELFTNIYVNGLGTESFGADRKEVRVTLP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01289 407 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 42 389 - -
Accr10g01289 407 Coils Coil 345 365 - -
Accr10g01289 407 CDD TPP_E1_PDC_ADC_BCADC 80 370 - -
Accr10g01289 407 Gene3D - 35 400 - -
Accr10g01289 407 FunFam Pyruvate dehydrogenase E1 component subunit alpha 39 400 - -
Accr10g01289 407 Pfam Dehydrogenase E1 component 83 378 IPR001017 GO:0016624
Accr10g01289 407 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 75 387 IPR017597 GO:0004739|GO:0006086|GO:0043231
Accr10g01289 407 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 69 388 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01289 Accr-Chr10 35613256 35617548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01289 1 407 Acyl Lipid Metabolism Gene Families AT1G24180 74.201 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01289 K00161 - zju:107428751 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g01289 10 35613256 35617548 Accr10g01289 10 35613256 35617548 ECH