Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00939 ATGAAAAGCCATGGGATTTGGGTTATCTTTATTTGCTTTCTTCTGGGTGCAACTTGTGTTGTACAAGAAGAGCTTGAAGTGGCTCCAATGGAGAAGAGAGAGCTTGAAGCTCTGTACTCTACCATACAAGGCTTTGCCGGAAATTGGTGGAATGGCTCAGATCTCTATCCGGATCCTTGTGGGTGGACTCCAATTCAGGGTATCTCTTGTGATCTATTTAATGGGTTTTGGTATGTTACTTCCTTGAACATAGGACCCATACATGAAAATTCTATATCTTGTTCCCAGAAGTCAGAATTTAGGCCTCAGTTGTTTGAGTTCAAGCACCTACAATCTTTGTCCTTCTTCAACTGCTTTGTATCAAGAGACCAGAATCCAGTTACTATCCCAACTGGGAACTGGGAGAAACTTTCTGGAAGCCTAGAATCACTCGAGTTTCGGTCGAATCCAGGTCTCATTGGAAAAATCCCCACAAGTTTTGGTCTTCTCAACAACCTCAAATCTCTGGTATTACTAGGAAATGGTTTAACAGGGGAAATACCACCAGATATAGGTAATCTTATGAAACTTAAGAGACTTGTTCTTGCAGGGAACTCTTGTAGTGGGCAGATTCCAGATATTTTCAGCAAGTTAAGCGAATTACTGATATTGGATTTAAGTGGAAATTCTCTTTCTGGGTCTTTGCCTTTATCTCTTGGAAGCTTAACTTCATTATTGAAGCTTGATGTACGCAGCAATAATCTAGAAGGAAATCTGCTGAATGGGTTTGGTAATCTCAAGAATCTGACCCTAATGGACCTAAGAAACAACAGATTCCAAGGTGGGTTGGTGTTGTCTATTCAAGAGATGTATTCCTTAGAAGAATTGGCCTTATCCAACAATCCAATTGGTGGAAGCTTCAGTGTTCTAAAGTGGGAAAATCTTCAGAACTTGGTAATTCTTGAACTCTCTAACATGGGATTGACAGGGGAAATACCAGAGTCCATAACAGAGTTAAGGAGATTGAGGTTTTTGGGTCTACGTGACAACCACCTCACAGGCAACCTTAATCCTAAGTTAGAAAGTCTTCCTTGTCTCAATGCACTGTACCTAAGTGGAAACAATCTGACCGGAGACCTTAAATTCTCCAAGCAGTTTTATGGCAAAATGGGTAGCCGTTTTGGGGCCTGGGATAACCCTAACCTTTGTTACCCTGTTGGAGAAATATCAACAAGTCAAGTTCCATTTGGAGTAAGACCTTGCCATCAAGAGGTCTAG 1257 0.4121 MKSHGIWVIFICFLLGATCVVQEELEVAPMEKRELEALYSTIQGFAGNWWNGSDLYPDPCGWTPIQGISCDLFNGFWYVTSLNIGPIHENSISCSQKSEFRPQLFEFKHLQSLSFFNCFVSRDQNPVTIPTGNWEKLSGSLESLEFRSNPGLIGKIPTSFGLLNNLKSLVLLGNGLTGEIPPDIGNLMKLKRLVLAGNSCSGQIPDIFSKLSELLILDLSGNSLSGSLPLSLGSLTSLLKLDVRSNNLEGNLLNGFGNLKNLTLMDLRNNRFQGGLVLSIQEMYSLEELALSNNPIGGSFSVLKWENLQNLVILELSNMGLTGEIPESITELRRLRFLGLRDNHLTGNLNPKLESLPCLNALYLSGNNLTGDLKFSKQFYGKMGSRFGAWDNPNLCYPVGEISTSQVPFGVRPCHQEV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00939 418 Pfam Leucine rich repeat 189 248 IPR001611 GO:0005515
Accr10g00939 418 SUPERFAMILY L domain-like 38 374 - -
Accr10g00939 418 Gene3D Ribonuclease Inhibitor 31 204 IPR032675 -
Accr10g00939 418 Gene3D Ribonuclease Inhibitor 205 303 IPR032675 -
Accr10g00939 418 FunFam Piriformospora indica-insensitive protein 2 205 301 - -
Accr10g00939 418 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 279 373 - -
Accr10g00939 418 FunFam Piriformospora indica-insensitive protein 2 33 204 - -
Accr10g00939 418 Gene3D Ribonuclease Inhibitor 304 401 IPR032675 -
Accr10g00939 418 FunFam Piriformospora indica-insensitive protein 2 302 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00939 Accr-Chr10 29429574 29431396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00939 123 414 Receptor kinase-like Gene Family AT4G08850 29.110 2.15e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00939 - - gmx:100783426 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00939 10 29429574 29431396 Accr10g00939 10 29429574 29431396 ECH