Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00935 ATGGAGTTCAGTTGCAAAGATTTCAAGGTGGGAAAATGTGAGGGAGAGAAAATAGTAGACGGAGAAGTCATGCCTTTGGTGCTTCTACCTCCAGAACCAAACAAGAGAGACTTGGAATCGTTACTCTCAGCTCTGAGAAACAACAAGGACTGGTTCGAGCAGATGATCATCAAGAACAGTGCCGTTCTTCTCCGAGATTTCGATGTCAATAACGCGGTCGACTTCAATGACATCGTCGAAACATGTGGCTGGGAAGACATTCGCTACGTTGGACCAGCTCCTCGCACTCAAATTCACAAGAGAATTTGGACTGCCAACGAAGGACCCCTCTCAGAGTTCATATACTATCATCATGAAATGGTTTTGATAAAGGAGTGTCCCAAGAAAGTAATACTCTTCTGCGAGATACCACCCCCACAAGGAGGAGAGACACCATTTGTTCCAAGCTTCAAAGTGACAGAGAAGATGCTGAAGGAGTTTCCAGAAGAAGTTAAGGAAATGGAAGAGAAAGGGTTGAAGTATTCATTCACGGCACGTAGTACCCAGAACGACACTTCCTCCATGAGAGGACGAGGATGGGAAGATGCCTTTGGGACCTCAGATCGCGAGGAAGCTGAAAGAAGGGCAAATGCTTTGGGGATGGATATGGAATGGCTACCAAATGGAGGTGTGAAGACGATACTGGGACCAAGGCCATTGACAAGGGTGTTTGAAGGAAGGAAAGGAAGGAGGATGTGGTTTAATACACTGGTAGGGATGTACGGGAAGGAGTTAAGCTCGGCGACATTTGCGGATGGAACTGAGATTCCAAGACATGTGGTGGAGAGGTGTGGAGAGATCATTGAAGAAGAAAGCATACAATTCAAGTGGCAGAAAGGGGATGTAGTCTTCCTCGATAACTTGGCTTTGCTTCATGGAAGAAGACCTTCCCTTCCTCCCAGAAAAGTTCTGGTTGCTACTTGCAAGTAG 969 0.4644 MEFSCKDFKVGKCEGEKIVDGEVMPLVLLPPEPNKRDLESLLSALRNNKDWFEQMIIKNSAVLLRDFDVNNAVDFNDIVETCGWEDIRYVGPAPRTQIHKRIWTANEGPLSEFIYYHHEMVLIKECPKKVILFCEIPPPQGGETPFVPSFKVTEKMLKEFPEEVKEMEEKGLKYSFTARSTQNDTSSMRGRGWEDAFGTSDREEAERRANALGMDMEWLPNGGVKTILGPRPLTRVFEGRKGRRMWFNTLVGMYGKELSSATFADGTEIPRHVVERCGEIIEEESIQFKWQKGDVVFLDNLALLHGRRPSLPPRKVLVATCK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00935 322 Gene3D - 5 322 IPR042098 -
Accr10g00935 322 SUPERFAMILY Clavaminate synthase-like 11 321 - -
Accr10g00935 322 MobiDBLite consensus disorder prediction 180 202 - -
Accr10g00935 322 Pfam Taurine catabolism dioxygenase TauD, TfdA family 35 317 IPR003819 GO:0016491
Accr10g00935 322 FunFam Clavaminate synthase-like protein At3g21360 5 322 - -
Accr10g00935 322 PANTHER GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED 15 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00935 Accr-Chr10 29327357 29329372 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00935 - - vra:106776893 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00935 10 29327357 29329372 Accr10g00935 10 29327357 29329372 ECH