Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00915 ATGGAGACTGTGATACGCGGGAGGTTAGCTCTCTCGCCCAACTACGTCTTCAAATCAAAGCAATCAAAGCCTGGGGACAAACATTCTCTTTGCAGAGGACCATTCTCTAATCTTTGCATTCCCATGGCTGCATTAGCAACAAGACTTGGTAAAGGAGGAGGACTACTGGAGAGACCTGTTATTGAAAAAGGCACTCCTGGTCGTGAGTCTGAGTTTGATTTGAGGAAATCAAGGAAAACAGCGCCACCATACCGAGTGATTCTGCACAACGACGACTTCAACAAACATAAATATGTGGTTCAAGTACTGATGAAGGTTATTCCTGGGATGAACCATGATGATGCATATAACATCATGCTAGAAGCTCACTACAATGGGTTGTCAGTGGTGATTATCTGTGCCCAAGCTGATGCCGAAGAACACTGCACACAACTACGAGGCAACGGTCTATGCAGTTCGATTGAACCTGCAAGTGGTGGCTGCTGCTAA 489 0.4581 METVIRGRLALSPNYVFKSKQSKPGDKHSLCRGPFSNLCIPMAALATRLGKGGGLLERPVIEKGTPGRESEFDLRKSRKTAPPYRVILHNDDFNKHKYVVQVLMKVIPGMNHDDAYNIMLEAHYNGLSVVIICAQADAEEHCTQLRGNGLCSSIEPASGGCC 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00915 162 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 78 156 - -
Accr10g00915 162 Pfam ATP-dependent Clp protease adaptor protein ClpS 80 147 IPR003769 GO:0030163
Accr10g00915 162 Hamap ATP-dependent Clp protease adapter protein ClpS [clpS]. 69 158 IPR022935 GO:0006508
Accr10g00915 162 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 28 161 IPR022935 GO:0006508
Accr10g00915 162 Gene3D - 62 158 IPR014719 -
Accr10g00915 162 SUPERFAMILY ClpS-like 78 156 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00915 Accr-Chr10 28825540 28828107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00915 K06891 - gmx:100527361 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00915 10 28825540 28828107 Accr10g00915 10 28825540 28828107 ECH