Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00913 ATGGCGTCTCCCGCCTTTTCATCATCCTCTTCCGATTCCGGTACTATTGCCGCCAGTGATCAGAATGCGCAGCGAATTCGGAGGAGTTGCGACGCCCATGACGCTGCGACCTTTGAGCAATCGCGTCGGTGGCATGATGTTTTCTGGTCGGGAATATTTATTGGTCATTTGATTTTTCTGGCATTTCATATGGCGCTTTTCGGCCTCGATAAGTTCAAGCACAGGCATAGAGAAAAACGTGGTTTGAACACCGAACTGCTTCCCACGCATAAACATGGATTTACCGAGGATTACTGGCTACTTTATGCTGTTGCTGGTGGAGTTGGGACTGTTCTCGGAGTGAGTTGGCTGCTGCTCTTGGGTTTTCGCGCGAATCAAATGATGAAGGTGTCTGTTCACATACTGACCACTTATCTTGCTGTGATCAGTGTTTTGTGTTTCTGGGCTTTAGAAAAGTTCTGGGGAATTTTTTTTGCCATCGGAGCAGCCCTGCAATTCTTGTACGTGATATCGGTCATTGACAGACTTCCGTTTACCATGCTGGTTCTGCAAAAAGCTATGAAGATGGTTTGCAGTCTTCCTGAGATTATGAGAGTGGCTTATGCATTTATGCTTGTGGCTCTATTATGGATGGCCTTATGGTCTTTTGGTGCATCAGGTGTTGTGGCTTCAAGCTTATTTCATGTTGTTGGATGCTGGTGGGTTCTTTCGATTCTTAGTGTCAGCCTATTCTGGACAGGCGCTGTACTCTGTAATACTGTACATGTAATAGTGTCTGGGATGGTGTTTCTCAATCTTATCCATGGTGGTAGAGATGCAACTTCAAAACCTGCTAACTCCTTAATAAGATCTTTACGATATGCCTTGACGAAATCCTTTGGCAGCATTTGTTATGGCTCATTATTTACTGCTGCTATCAGGACACTTAGATGGGAGATAAGGGGTGTCCGGTCGAAGATCGGCAACAACGAGTGTTTGCTTTGCTGTGTTGATTTCCTTTTCCATCTTGTGGAGACTCTTGTCCGATTCTTTAACAAGTATGGCTATGTTCAGATAGCTGTTAATGGTAAAAGCTTTAACCGTTCAGCTAGAGATGCCTGGGAGTTACTCCAGTCAACTGGTGTTGAAGCACTTGTAGCATATGACTGTTCGGGTGCGGTCCTGCTGATGGGCACCATCTGCGGTGGTTTGATTACCGGAACATGCTCTGGTGTATGGGCGTGGTTCAGATTTACCGACCTAGAGAGAGTAATTATGATCGGAACCACATCCATGTTGATGGGGATGGTCTTGGTTGGGGTGGCCATGGTTGTGGTGGAAAGTGCAGTGACATGCATATATATCTGCTATGCGGAGGACCCGTTGTTGATTCAGAGATGGGACGCTGAATTTTTCAACCAGATGTCTGAGACACTGCACCAGAGACTTCAACATAGGAGCACTCGAACAACCAACTCGCAACTTGATTACCGTGTTTGA 1479 0.4598 MASPAFSSSSSDSGTIAASDQNAQRIRRSCDAHDAATFEQSRRWHDVFWSGIFIGHLIFLAFHMALFGLDKFKHRHREKRGLNTELLPTHKHGFTEDYWLLYAVAGGVGTVLGVSWLLLLGFRANQMMKVSVHILTTYLAVISVLCFWALEKFWGIFFAIGAALQFLYVISVIDRLPFTMLVLQKAMKMVCSLPEIMRVAYAFMLVALLWMALWSFGASGVVASSLFHVVGCWWVLSILSVSLFWTGAVLCNTVHVIVSGMVFLNLIHGGRDATSKPANSLIRSLRYALTKSFGSICYGSLFTAAIRTLRWEIRGVRSKIGNNECLLCCVDFLFHLVETLVRFFNKYGYVQIAVNGKSFNRSARDAWELLQSTGVEALVAYDCSGAVLLMGTICGGLITGTCSGVWAWFRFTDLERVIMIGTTSMLMGMVLVGVAMVVVESAVTCIYICYAEDPLLIQRWDAEFFNQMSETLHQRLQHRSTRTTNSQLDYRV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00913 492 Pfam Plasma-membrane choline transporter 156 454 IPR007603 GO:0022857|GO:0055085
Accr10g00913 492 MobiDBLite consensus disorder prediction 1 22 - -
Accr10g00913 492 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 25 483 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00913 Accr-Chr10 28778097 28782636 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00913 - - gmx:100820196 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00913 10 28778097 28782636 Accr10g00913 10 28778097 28782636 ECH