Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00859 ATGACGACGTCGTCAAATTCGAAATACTCCTCGTGCCCTGTTTCGAAAATCTTCAACCCTCAATTTCAAATCCTTCATTTTCTATCCAATTTCTTTCTGTTAGGCTGTGGAATAACTCTGGGAATCGTTCTGAGTTTCTACATCAAAGGTTGCAACTTGAGCCTGCAAATCTCTCGTCTCTCTGTCTCTGAATTTTCCGGCAACACAACGACGACTCCGACAACTTACCCCACGTTGAAGAACTATTTAAAGCCACCACCTGTGATGCACCACATGGACGATAAAGAGCTTCTATGGAGAGCTTCAATGGCTCCAAGGATCAATGAATATCCATTTAATCGAACTCCTAAAGTGGCCTTCATGTTCTTGACGAGAGGTCCTGTTTTTATGGCTCCCTTGTGGCAAAAGTTCTTCAAAGGCCATGAAAAGTTTTACTCAATTTATGTTCATTCCAATCCTTCTTACAATGGATCAGACCCTGAAAGTCCAGTCTTCCATGGCCGCAGAATTCCCAGTAAGGAAGTGAAATGGGGAGGTGTGAACATGATCGAAGCGGAGCGTCGTTTACTGGCAAACGCACTGCTTGACATTGGGAACCAACGTTTCGTGCTGTTATCGGAATCTTGCATTCCGCTCTTCAACTTCTCCACCGTCTACTCCTACCTCATCAACTCCTCCGTCAGCCACGTCATGTCCTACGACGAACGCTCCCCGGTCGGACGTGGCCGCTACAGCTCCCATATGCGCCCCCTCATCACCGTCGACCAGTGGCGGAAGGGCTCTCAGTGGTTCGAAATGGACCGGGAGCTCGCCCTCGCCGTCGTCTCCGACAACACTTACTTTCCGCTGTTCCAGGAACACTGCAAACGGTCATGTTACTCCGACGAGCACTACTTGCCGACGTTCGTGAGCATGGAGCACGCGGGAAAGAACTCGAACCGGACCTTGACTTGGGTTGACTGGTCAAAGGGTGGGCCCCATCCTACGACATTGGTTAGGAACTATGTCACGGTTGAGTTCTTGAAGGCGTTGAGGAACACGACGTGTGAGTATAATGGTGTGAAAGATAGTAATGTGTGTTACCTCTTTGCTAGGAAGTTCTTGCCTGGTACGTTAATTAGACTTCTCAGATTTGCTCCAAAGGTTATGCAATTCTGA 1158 0.4827 MTTSSNSKYSSCPVSKIFNPQFQILHFLSNFFLLGCGITLGIVLSFYIKGCNLSLQISRLSVSEFSGNTTTTPTTYPTLKNYLKPPPVMHHMDDKELLWRASMAPRINEYPFNRTPKVAFMFLTRGPVFMAPLWQKFFKGHEKFYSIYVHSNPSYNGSDPESPVFHGRRIPSKEVKWGGVNMIEAERRLLANALLDIGNQRFVLLSESCIPLFNFSTVYSYLINSSVSHVMSYDERSPVGRGRYSSHMRPLITVDQWRKGSQWFEMDRELALAVVSDNTYFPLFQEHCKRSCYSDEHYLPTFVSMEHAGKNSNRTLTWVDWSKGGPHPTTLVRNYVTVEFLKALRNTTCEYNGVKDSNVCYLFARKFLPGTLIRLLRFAPKVMQF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00859 385 Pfam Core-2/I-Branching enzyme 118 344 IPR003406 GO:0016020|GO:0016757
Accr10g00859 385 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 53 376 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00859 Accr-Chr10 27263980 27265794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00859 - - twl:120005799 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00859 10 27263980 27265794 Accr10g00859 10 27263980 27265794 ECH
Accr10g00859 10 27263980 27265794 Accr9g01868 9 40494288 40497823 ECH