Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00478 ATGTCGGTCACCTCGCAGACTCCGCCCTCTGCTTCTCTGTGCATTCAGCGACGATCTAGATTTTCAGCTGCTTCCGCTTCTCCTCCTTCTCTACTCCTGAAATCTCACAGACTCTTCCCTCAAATCCGTGCCTCCGCTGGATCGTCTTCGTCTGTCGACACCGGTTTGATCACTGAATTGGATGCTGTATCTGGTTTCAGTGAGATAGTTCCTGACACTGTTATTTTTGATGATTTCGAAAGGTTCCCTCCTACTGCTGCTACAGTCAGTTCATCGCTTCTCCTGGGTATATGTGGCCTTCCAGACACAATATTTAGGAATGCTGTGGATATGGCCTTGGCAGATTCTGAATGTTCAGGGCTTGCAAGTTCTGACGCTAGACTGCCTTGTTTCTTTAACAAGGCTTTAGTTAATGTTGGGGGTGACATGGCAAAACTGGTCCCTGGTCGTGTTTCAACTGAGGTGGATGCGCGTCTTGCTTATGACACGCATGGCATCATCAGGAAGGTGCATGACCTTTTGAAGTTGTACAATGATATTAATGTTCCTCCTGAACGCCTATTGTTCAAAATTCCTTCAACCTGGCAAGGAATAGAGGCTGCAAACTTGCTTGAATCTGAGGGCATACAAACACATTTGACTTTTGTTTTCAGCTTTGCCCAAGCTGCTGCTGCAGCCCAAGCTGGTGCTTCTGTTATCCAAATTTTCGTGGGTCGCTTTAGGGACTGGGCACGGAATCATTCAGGAGATCGAGAGATAGAATCAGCCCTAGCAAGAGGAGAAGATCCTGGTTTGGCATTGGTGACAAAGGCTTACAATTATATTCATAAATATGGACACAAGTCAAAGTTGATGGCAGCAGCTATACGTAACAAGCAGGACTTATTGAGTCTTCTGGGGGTTGACTATATCGTAGCACCATTGAAGGTTTTGCTGTCTCTCAAAGAATCTGTGACTTATCCTGATGAGAAGTACTCTTTTATTAGAAGACTGTCCCCTCAGTCTGCTGCTAATTACACATTCAGCGATGAAGAGCTTGTGAAGTGGGACCAAATGAGTCTGGCTTCAGCAATGGGGCCAGCAGCTGTGCAACTTCTTGCTGCTGGACTCGATAGCAATGCGGATCAAGCGAAGCGAGTGGAGGAGTTCTTTGGCAAGATCTGGCCACCCCCAAATGTATGA 1182 0.4662 MSVTSQTPPSASLCIQRRSRFSAASASPPSLLLKSHRLFPQIRASAGSSSSVDTGLITELDAVSGFSEIVPDTVIFDDFERFPPTAATVSSSLLLGICGLPDTIFRNAVDMALADSECSGLASSDARLPCFFNKALVNVGGDMAKLVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYNDINVPPERLLFKIPSTWQGIEAANLLESEGIQTHLTFVFSFAQAAAAAQAGASVIQIFVGRFRDWARNHSGDREIESALARGEDPGLALVTKAYNYIHKYGHKSKLMAAAIRNKQDLLSLLGVDYIVAPLKVLLSLKESVTYPDEKYSFIRRLSPQSAANYTFSDEELVKWDQMSLASAMGPAAVQLLAAGLDSNADQAKRVEEFFGKIWPPPNV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00478 393 FunFam Transaldolase B 57 387 - -
Accr10g00478 393 Gene3D Aldolase class I 57 386 IPR013785 -
Accr10g00478 393 SUPERFAMILY Aldolase 58 388 - -
Accr10g00478 393 CDD Transaldolase_TalAB 58 384 IPR004730 GO:0004801|GO:0005737|GO:0006098
Accr10g00478 393 Pfam Transaldolase/Fructose-6-phosphate aldolase 113 378 IPR001585 GO:0005975
Accr10g00478 393 PANTHER TRANSALDOLASE 53 388 IPR001585 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00478 Accr-Chr10 8124296 8129406 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00478 K00616 - qsa:O6P43_024314 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00478 10 8124296 8129406 Accr10g00478 10 8124296 8129406 ECH