Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00471 ATGCGGGTGAAAGAAATGCATCCTCTTTGCTGTATCTCACTGGAGAGTCCTGGAATCGGGAATCAATCACCGGAGGCGTCGCTTTCGAGGACTAGGAGTTTGCCGGCGAGTATGGCTTTAGTCGGATCTGAGCGCAATGCCGGCGGGCGGGCTCTGGGATCGGAGGCGACGGTGGCCGGGATCCTCTATAAGTGGACCAATTACAGCAAAGGATGGAGATCCCGGTGGTTCCTCTTGAGAAATGGCGTCCTCTCTTACGCCAAGATCCGGTGGCCGGAAAACCTCAATCTCCTCACGCCAACCGATGACGTCAGGTTGATTGGCGAAATCTCAACTAACCGATTGGCGAGGATGGACAACATGAGTAGTAGTGTGCGTCGGAAGAACCAGAAATCTGCGTCTGGCGTAGTCCTCCTCAAGGTTTCGTCATTTAGAGTGAGCAAATCAGACGATCGACGGTTCTATATCTTTACTGCTACCAAGACTCTCCATCTTAGAACTGATTCAAGGAAAGATCGAGAGGCGTGGATACAAGCATTGGAATCTACTCGTTGCTTGCATCCACTTAGATCACTGAAGGATAATAATATTTCCCTTGTACCCACTGATATATCTATATCAACTGAGAGCCTCAAGAAGCGCTTGCTTGAGGAAGGAGCTTCTGAGAATGTTGTGAAGGAATGTGAACAAATAATGCTCTCTGAGTTCTCGAGAATGCACGGGCAGCTTAAAATTCTTTGTGAAGAGCGATCGAATTTGCTTGATACAATAAGGCAGTTGGAGGCAGCTAACATTGAACCTGAGGCCTCTGGGATCCATGATGGTGAATACCAGTTAACTAAGCATGAATTTTCAAGTTTAGGACGTGGAAAGTATAGTGAATGCAGTACAACTGAATCATCTGAAGATATTGAGAAACAGGAGATGGAAGAAGTGTCAGACGAAGATGAAATCTCATACTACGACACTGCAGAGAACTTTGCAGAATTCAGGTGTGGGTCATCATCAGGACCTGATGATATCGAGAAAATTCAGCCTCAGATCTCAAGACGAAGAAAGCTTCCTGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAAGACAATGTGGGAAAGGATCTCTCACGTATTTGCCTTCCTGTGTACTTTAATGAGCCGATATCTTCTCTTCAGAAATGTTCTGAGGACCTAGAATACTCTTACCTTTTGGACCGAGCTTATGAGTATGGAAAATCGGGAAACAGTCTCCTTCGGGCGCTGAATGTTGCAGCCTTTGCAGTTTCTGGATATGCATCGTCTGAAGGTCGTCATTGTAAACCCTTCAATCCTTTGTTGGGGGAAACTTATGAAGCTGATTTTCCCGAGAAAGGAATTCGATTCTTTTCTGAAAAGGTCAGTCATCATCCAACTCTCATTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGGTGACAGTAACATTCATTCAAAGTTTTGGGGCAGGTCAATTCAGCTTGACCCAGTGGGAGTTCTAACCCTAGAATTTGATGACGGTGAAATATTTCAGTGGAGTAAGGTCACCACCACAATTTATAATCTTATCCTTGGTAAAATATACTGCGATCATCATGGAAACATGGACATACGTGGTAATCGCCAGTATTCATGCAGACTCAAGTTTAAAGAGCAGACTATTCTTGACCGAAATCCTCACCAGGTGCATGGATTTGTTGAAGATGTTTCGGGGAAAAAAGATGCTGCGATATTTGGCAAGTGGGATGACTGCATGTACTACGTTATTGGTGATGAGAATGTCAAGTCAAAGCATACTCCATTAGACGCATCAATGTTGTGGAAAAGGACTAAACCTCCTACTAATCTCACTCGTTACAACATGACATCGTTCGCTATCACTCTGAACGAGCTTGTACCAGGATTGAAGCTTTGTCTGATCCCGGGTATTTGA 1962 0.4485 MRVKEMHPLCCISLESPGIGNQSPEASLSRTRSLPASMALVGSERNAGGRALGSEATVAGILYKWTNYSKGWRSRWFLLRNGVLSYAKIRWPENLNLLTPTDDVRLIGEISTNRLARMDNMSSSVRRKNQKSASGVVLLKVSSFRVSKSDDRRFYIFTATKTLHLRTDSRKDREAWIQALESTRCLHPLRSLKDNNISLVPTDISISTESLKKRLLEEGASENVVKECEQIMLSEFSRMHGQLKILCEERSNLLDTIRQLEAANIEPEASGIHDGEYQLTKHEFSSLGRGKYSECSTTESSEDIEKQEMEEVSDEDEISYYDTAENFAEFRCGSSSGPDDIEKIQPQISRRRKLPDPVEKEKGVSLWSMIKDNVGKDLSRICLPVYFNEPISSLQKCSEDLEYSYLLDRAYEYGKSGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWGDSNIHSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSCRLKFKEQTILDRNPHQVHGFVEDVSGKKDAAIFGKWDDCMYYVIGDENVKSKHTPLDASMLWKRTKPPTNLTRYNMTSFAITLNELVPGLKLCLIPGI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00471 653 Pfam Oxysterol-binding protein 365 643 IPR000648 GO:0008289
Accr10g00471 653 FunFam oxysterol-binding protein-related protein 1D isoform X1 451 621 - -
Accr10g00471 653 Gene3D - 51 186 IPR011993 -
Accr10g00471 653 ProSiteProfiles PH domain profile. 55 185 IPR001849 -
Accr10g00471 653 SUPERFAMILY Oxysterol-binding protein-like 360 626 IPR037239 -
Accr10g00471 653 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 57 645 IPR000648 GO:0008289
Accr10g00471 653 SUPERFAMILY PH domain-like 54 182 - -
Accr10g00471 653 SMART PH_update 56 187 IPR001849 -
Accr10g00471 653 Gene3D - 451 622 - -
Accr10g00471 653 Pfam Pleckstrin homology domain 60 181 - -
Accr10g00471 653 Coils Coil 243 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00471 Accr-Chr10 7846660 7855324 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00471 K20456 - qsa:O6P43_024320 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00471 10 7846660 7855324 Accr10g00471 10 7846660 7855324 ECH