Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00461 ATGGCTTCCAAAACTTCCTCTTTTGCCCTTTTCCTTGTCCTCAACCTCCTCTTCTTCTCACTTGTCACCGCATGTGGCTCATGCGGGGGCTACCCTAACCCTAACCCTAACCCCAACCCAAACCCAAGGCCCAGGCCAAACCCAAACCCTAGCCCGTCCGGTGGAAGTGGCACATGCCCTAGGGATGCCTTAAAACTTGGGGTGTGTGCTAATGTTCTTAACGGTTTGCTTAACGTGACCCTTGGACAGCCACCAGTGGCCCCTTGCTGCACTCTGCTTCAAGGACTGGCCGACCTTGAAGCTGCCGTATGTCTCTGCACTGCCCTTAAAGCTAACATTTTGGGCATTAACCTCAACCTTCCTATCTCTCTCAGCTTGCTTCTTAATGTTTGCTCTCGCAATGTTCCTCGTGGTTTCCAATGCGCTTGA 429 0.5221 MASKTSSFALFLVLNLLFFSLVTACGSCGGYPNPNPNPNPNPRPRPNPNPSPSGGSGTCPRDALKLGVCANVLNGLLNVTLGQPPVAPCCTLLQGLADLEAAVCLCTALKANILGINLNLPISLSLLLNVCSRNVPRGFQCA 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00461 142 SMART aai_6 59 141 IPR016140 -
Accr10g00461 142 PANTHER - 5 141 - -
Accr10g00461 142 FunFam pEARLI1-like lipid transfer protein 1 57 142 - -
Accr10g00461 142 CDD HPS_like 57 141 IPR027923 -
Accr10g00461 142 MobiDBLite consensus disorder prediction 35 58 - -
Accr10g00461 142 MobiDBLite consensus disorder prediction 35 53 - -
Accr10g00461 142 Pfam Hydrophobic seed protein 58 142 IPR027923 -
Accr10g00461 142 Gene3D - 58 142 IPR036312 -
Accr10g00461 142 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Accr10g00461 142 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 61 141 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00461 Accr-Chr10 7684727 7685155 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00461 49 141 Acyl Lipid Metabolism Gene Families AT4G22490 40.860 3.81e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00461 - - tcc:18606293 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00461 10 7684727 7685155 Accr10g00461 10 7684727 7685155 ECH