Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00348 ATGTACAGAGTGGAAGGAGGTGTTGTTGGGTCCAAATCCGAGGTGGGTTCCGTCGATCGGAAGCGAATCAACGACGTCCTCGACAAGCAGCTCGAGCGATCTTCTCCGTCTACTTCTAGGGCTATCAGGGCCAAGGATAGGTCGTCGGAGCAGTTGCTTTTCCCCTCTAAGCCGCCCTCCGATCCCAGGGACTCTCGCGCTGCCTCCATCTCGAAGAATTCCAACCCTTCACATGAGGAATCTGAAACAGACAGTGAAGCATCAGATGTTAGTGGTTCTGATGGGGATGATACATCTTGGATCTCATGGTTTTGCAATCTCAGAGGAAATGAATTCTTTTGCGAGATAGATGATGATTACATACAAGATGAATTCAACCTCTGTGGATTAAGCAGTCAAGTGCCTTATTATGATTATGCACTTGATCTAATTTTGGATGTTGAGTCTTCTCATGAGGAACAAAATGAATTAGTAGAATCAGCAGCAGAGATGCTTTATGGCCTGATTCACGCTCGGTACATTTTGACCAGCAAAGGGATGGTCGCTTTGCTGGACAAGTACAAGAACTATGACTTTGGAAGATGTCCAAGAGTGTACTGCTCAGGACAACCCTGCCTTCCAGTTGGTCTGTCAGACATCCCTAGGTCAAGTACTGTAAAAATCTATTGCCCCAAGTGCGAAGACATTTATTACCCGCGGTCTAAGTATCAAGATATTGATGGAGCTTACTTTGGAACCACGTTTCCTCACCTCTTCTTGATGACATATGGGCATCTGAAGCCACAAAAGCCGTCCCAGAATTATGTTCCAAGAGTTTTTGGATTCAAAATTCACAAGCCATGA 843 0.4555 MYRVEGGVVGSKSEVGSVDRKRINDVLDKQLERSSPSTSRAIRAKDRSSEQLLFPSKPPSDPRDSRAASISKNSNPSHEESETDSEASDVSGSDGDDTSWISWFCNLRGNEFFCEIDDDYIQDEFNLCGLSSQVPYYDYALDLILDVESSHEEQNELVESAAEMLYGLIHARYILTSKGMVALLDKYKNYDFGRCPRVYCSGQPCLPVGLSDIPRSSTVKIYCPKCEDIYYPRSKYQDIDGAYFGTTFPHLFLMTYGHLKPQKPSQNYVPRVFGFKIHKP 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00348 280 MobiDBLite consensus disorder prediction 15 29 - -
Accr10g00348 280 SUPERFAMILY Casein kinase II beta subunit 97 279 IPR035991 GO:0005956|GO:0019887
Accr10g00348 280 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 92 191 IPR016149 GO:0005956|GO:0019887
Accr10g00348 280 Pfam Casein kinase II regulatory subunit 99 276 IPR000704 GO:0005956|GO:0019887
Accr10g00348 280 PRINTS Casein kinase II regulatory subunit family signature 191 212 IPR000704 GO:0005956|GO:0019887
Accr10g00348 280 PRINTS Casein kinase II regulatory subunit family signature 213 234 IPR000704 GO:0005956|GO:0019887
Accr10g00348 280 PRINTS Casein kinase II regulatory subunit family signature 166 187 IPR000704 GO:0005956|GO:0019887
Accr10g00348 280 PRINTS Casein kinase II regulatory subunit family signature 116 130 IPR000704 GO:0005956|GO:0019887
Accr10g00348 280 PRINTS Casein kinase II regulatory subunit family signature 99 115 IPR000704 GO:0005956|GO:0019887
Accr10g00348 280 PRINTS Casein kinase II regulatory subunit family signature 240 257 IPR000704 GO:0005956|GO:0019887
Accr10g00348 280 ProSitePatterns Casein kinase II regulatory subunit signature. 195 226 IPR000704 GO:0005956|GO:0019887
Accr10g00348 280 Gene3D - 192 265 - -
Accr10g00348 280 SMART CK_II_beta_2 99 276 IPR000704 GO:0005956|GO:0019887
Accr10g00348 280 MobiDBLite consensus disorder prediction 1 94 - -
Accr10g00348 280 FunFam Casein kinase II subunit beta 192 265 - -
Accr10g00348 280 PANTHER CASEIN KINASE II SUBUNIT BETA 78 279 IPR000704 GO:0005956|GO:0019887
Accr10g00348 280 FunFam Casein kinase II subunit beta 92 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00348 Accr-Chr10 5666167 5669538 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00348 K03115 - gmx:100799304 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00348 10 5666167 5669538 Accr9g00556 9 6429381 6431672 CCT