Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00344 ATGTACAGAGATCGAGGAGCAGTTGGATCGAAATCGGAAGTTGGTTCCGTTGATCGGAAGCGAATCAATGACGTCCTGGACAAGCAGCTTGAGCGATCCTCGCCGTCGACATCTAGGACCATCAACGGCAAGGATAGGTCGGCAACATCCGTGCTGACTGGTAAGCCACCCCCTGATCATCGGGACCCACGTTCAGCTCCCGTCTCCAAAAACACCAACGCTTCGGATGAGGAATCTGAAACAGACAGTGAAGAGTCAGATGTTAGTGGTTCTGATGGGGATGACACATCTTGGATTTCATGGTTTTGCAATCTGAGAGGAAATGAATTCTTTTGTGAGGTTGATGATGATTACATCCAAGATGACTTCAACCTCTGCGGATTAAGCAGTCAAGTACCTTACTATGATTATGCGCTTGATTTAATTCTGGATGTTGAATCCTCCCACGGTGACATGTTCACAGAGGAACAAAATGAATTAATTGAATCAGCAGCAGAGATGCTATATGGCCTAATTCATGCCCGATACATCTTAACAAGCAAAGGAATGGCTGCGATGCTGGACAAGTACAAGAACTACGATTTTGGTAGATGCCCAAGAGTTTACTGCTCTGGACAACCCTGCCTTCCAGTTGGTCAGGCAGACGTTCCCCGGTCAAGTACTGTGAAAATATATTGTCCTCGCTGTGAAGATATTTACTATCCTCGGTCCAAGTATCAAGGCAACATCGATGGAGCTTATTTTGGGACGACGTTTCCTCATCTGTTCCTGATGACGTACGGACAACTGAAGCCACAAAAACCATCACAGAGCTATGTTCCAAGGGTTTTTGGTTTCAAAATTCACAAGCCATGA 855 0.4585 MYRDRGAVGSKSEVGSVDRKRINDVLDKQLERSSPSTSRTINGKDRSATSVLTGKPPPDHRDPRSAPVSKNTNASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQADVPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQSYVPRVFGFKIHKP 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00344 284 Gene3D - 195 269 - -
Accr10g00344 284 MobiDBLite consensus disorder prediction 1 93 - -
Accr10g00344 284 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 90 194 IPR016149 GO:0005956|GO:0019887
Accr10g00344 284 MobiDBLite consensus disorder prediction 14 28 - -
Accr10g00344 284 Pfam Casein kinase II regulatory subunit 97 280 IPR000704 GO:0005956|GO:0019887
Accr10g00344 284 ProSitePatterns Casein kinase II regulatory subunit signature. 198 229 IPR000704 GO:0005956|GO:0019887
Accr10g00344 284 SMART CK_II_beta_2 97 280 IPR000704 GO:0005956|GO:0019887
Accr10g00344 284 MobiDBLite consensus disorder prediction 29 49 - -
Accr10g00344 284 FunFam Casein kinase II subunit beta 195 269 - -
Accr10g00344 284 PANTHER CASEIN KINASE II SUBUNIT BETA 76 283 IPR000704 GO:0005956|GO:0019887
Accr10g00344 284 SUPERFAMILY Casein kinase II beta subunit 95 283 IPR035991 GO:0005956|GO:0019887
Accr10g00344 284 FunFam Casein kinase II subunit beta 90 194 - -
Accr10g00344 284 PRINTS Casein kinase II regulatory subunit family signature 216 237 IPR000704 GO:0005956|GO:0019887
Accr10g00344 284 PRINTS Casein kinase II regulatory subunit family signature 114 128 IPR000704 GO:0005956|GO:0019887
Accr10g00344 284 PRINTS Casein kinase II regulatory subunit family signature 194 215 IPR000704 GO:0005956|GO:0019887
Accr10g00344 284 PRINTS Casein kinase II regulatory subunit family signature 169 190 IPR000704 GO:0005956|GO:0019887
Accr10g00344 284 PRINTS Casein kinase II regulatory subunit family signature 97 113 IPR000704 GO:0005956|GO:0019887
Accr10g00344 284 PRINTS Casein kinase II regulatory subunit family signature 244 261 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00344 Accr-Chr10 5610575 5613252 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00344 K03115 - qsa:O6P43_024428 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00556 9 6429381 6431672 Accr10g00344 10 5610575 5613252 CCT
Accr10g00344 10 5610575 5613252 Accr10g00344 10 5610575 5613252 ECH