Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00300 ATGGCCATGGCGGCCACGAAGGACCCGCCATCACCGGCTTTTCTCGATACTATTGACGAGATTACGAGAATTTACAGATCGCTTCCCCTTCGACCTTCGATTGAAGAAGTCGAAGCTGCGACTTCTGCTATCGAAACTATCAATAGCGAGGAGAATATGAAGCTCGAGGAAATCTCAATGCAGCAAGTCCCCGACGGTGTTCCCGAGCAGCTTTTCTCTCTCTTACAGGAATTGAAGAAGACCGTGGTCTTGTTCCAGAGCCATGAACAGAGGAAAGAAGCTCTCCACCTTCTTCAACAAGAGAAGATGTTTCACACCCTCGGTGATCTTATTCAGAGGGCTTCTCAGTTCATTTCTGGGGAACCTGCAGAACCGGAACCGCCCAATTTAGTCGAACCGGCGGGGGAAATCGAGATTGACGTTCGTATCGGTGATGACAGTCTACTGAAGGGAAAGGAAGACGTAGATAAACCGGAGAAAATCAACCTCAACGTTGAAAGAAGATCGTCTGCTAAGACATCTTTCTCTGCTGCTGATGGAAACTCTGAGAAACTAAGTCTCATGAAAGTGGCCACTGTTATTGAAACCTATGCTAGTAGTGGAGCAACATTCCTTGAGCTTAGAGGGAAACTTGTGGACCAGATGGAATGGTTGCCTGTTTCAATTGGGAAACTCTCTAATGTGTGTGAGATGGACCTATCTGAGAACAGAATCATGGCTCTTCCTTCCACCTTTGGGGAGCTCAAGGCCTTAACAAAGCTTGATCTTCATGCCAACCAGCTTATAAACCTTCCGCACTCTTTTGGGGAATTGATCAACCTCACTGATATTGACCTCCGTGGCAATAGGTTGAGATCACTGCCAACTTCTTTTGAAAAGTTGGAGAATCTCATTGATCTTGACCTGAGTTCAAATGAGTTTGCACAATTACCTGATTTGATTGGGAATTTAAGAAGCTTGAGGAGATTAAACATTGAGATGAACGAACTTGAGGAGCTACCTTATACGATTGGAAATTGCTCGTCACTCTCAGAGTTGAGATTAGACTTTAATCAGCTCAAAGCCCTTCCTGAGGCAATTGGGAATCTTGAGTTATTGGAGATTTTAACTCTGCACTATAACAGAGTTAAAAGGTTGCCTACTACAACGGGGAACCTCATAAGATTGAAGGAACTTGACGCTAGCTTTAATGAACTGGAATTCATACCAGAGAACCTATGTTTTGCTGTGAGTCTGAAGAAATTAAACGTGTCTAATAACTTTGCAGACCTGAGAGCCTTGCCAAAATCAATTGGGAATCTTGAAATGCTTGAGGAGTTGGATATAAGTGATGATCAAATAAAAGCATTACCAGAGTCTTTCCGGTTCTTGTCCAAATTGAGAGCTTTTCGTGCTGATCAGACTCCTCTTGAAGTACCACCCAGAGAAGTGGTCAAGTTGGGTGCTCAGGAAGTTGTGCAGTACATGGCCGATTTTGTAGCCAAGAGGGATGCGAAACTTCTGGTACCAAAGAAGAAGAAGATGGGGTTTTGGTTCTGGTTTTGCTCAATATTTTGCTCCAAACAGAGACGATTTTGA 1578 0.4398 MAMAATKDPPSPAFLDTIDEITRIYRSLPLRPSIEEVEAATSAIETINSEENMKLEEISMQQVPDGVPEQLFSLLQELKKTVVLFQSHEQRKEALHLLQQEKMFHTLGDLIQRASQFISGEPAEPEPPNLVEPAGEIEIDVRIGDDSLLKGKEDVDKPEKINLNVERRSSAKTSFSAADGNSEKLSLMKVATVIETYASSGATFLELRGKLVDQMEWLPVSIGKLSNVCEMDLSENRIMALPSTFGELKALTKLDLHANQLINLPHSFGELINLTDIDLRGNRLRSLPTSFEKLENLIDLDLSSNEFAQLPDLIGNLRSLRRLNIEMNELEELPYTIGNCSSLSELRLDFNQLKALPEAIGNLELLEILTLHYNRVKRLPTTTGNLIRLKELDASFNELEFIPENLCFAVSLKKLNVSNNFADLRALPKSIGNLEMLEELDISDDQIKALPESFRFLSKLRAFRADQTPLEVPPREVVKLGAQEVVQYMADFVAKRDAKLLVPKKKKMGFWFWFCSIFCSKQRRF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00300 525 ProSiteProfiles Leucine-rich repeat profile. 296 317 IPR001611 GO:0005515
Accr10g00300 525 SMART LRR_typ_2 434 456 IPR003591 -
Accr10g00300 525 SMART LRR_typ_2 386 409 IPR003591 -
Accr10g00300 525 SMART LRR_typ_2 271 293 IPR003591 -
Accr10g00300 525 SMART LRR_typ_2 317 340 IPR003591 -
Accr10g00300 525 SMART LRR_typ_2 363 385 IPR003591 -
Accr10g00300 525 SMART LRR_typ_2 225 247 IPR003591 -
Accr10g00300 525 SMART LRR_typ_2 248 270 IPR003591 -
Accr10g00300 525 SMART LRR_typ_2 294 316 IPR003591 -
Accr10g00300 525 SMART LRR_typ_2 341 362 IPR003591 -
Accr10g00300 525 FunFam Plant intracellular Ras-group-related LRR protein 4 184 492 - -
Accr10g00300 525 Gene3D Ribonuclease Inhibitor 180 491 IPR032675 -
Accr10g00300 525 SMART LRR_bac_2 317 336 - -
Accr10g00300 525 SMART LRR_bac_2 340 359 - -
Accr10g00300 525 SMART LRR_bac_2 434 453 - -
Accr10g00300 525 SMART LRR_bac_2 294 313 - -
Accr10g00300 525 SMART LRR_bac_2 409 430 - -
Accr10g00300 525 SMART LRR_bac_2 271 290 - -
Accr10g00300 525 SMART LRR_bac_2 363 382 - -
Accr10g00300 525 SMART LRR_bac_2 248 267 - -
Accr10g00300 525 SMART LRR_bac_2 386 405 - -
Accr10g00300 525 Pfam Leucine rich repeat 265 306 IPR001611 GO:0005515
Accr10g00300 525 SUPERFAMILY L domain-like 202 466 - -
Accr10g00300 525 PANTHER LEUCINE-RICH REPEAT-CONTAINING 215 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00300 Accr-Chr10 5045628 5048306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00300 218 482 Receptor kinase-like Gene Family AT4G13920 28.657 5.25e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00300 - - gmx:100798442 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00300 10 5045628 5048306 Accr10g00300 10 5045628 5048306 ECH