Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00159 ATGGACGCGGGAGCAGCCGGCGCCGGCACCGCCGTAGACGATCTTCCTATGACGGCTGCCATATCGCGGTGGAAATTCGCCGTGTCCCGGCAGTATCAGCATCTGCTCGACAAAGCGACACCGCACGTCCTCCACCGTTGGATCGCCTGCTTAGTCGTTGTCTTCATCTACGTCGTCCGCGTTTACTTCGTCCAGGGGTTCTACATCGTCTCTTATGGTCTAGGCATTTACATCCTCAATCTTCTAATCGGATTTCTCTCCCCTCAGATTGACCCCGAGATCCAAGAAATCTCTGATGGTCCATCACTTCCCACCAGGGGTTCCGATGAATTTCGTCCTTTCGTTCGCCGGCTCCCGGAGTTTAAGTTCTGGTACTCAATCACAAAGGCATTTTGCATTGCGTTTGTGATGACCTTTTTTAACGTATTTGATGTACCAGTGTTTTGGCCAATTCTTCTCTTCTACTGGGTAGTCCTATTCTCCGTTACCATGAGGAGACAGATATCTCACATGATCAAATACAGATATGTGCCATTCACATTTGGGAAACAGCGCTATGATGGAAAGAGAACAACGGAAGAGAGCTCATCCCTTCCCCCTAGGGACTGA 609 0.5008 MDAGAAGAGTAVDDLPMTAAISRWKFAVSRQYQHLLDKATPHVLHRWIACLVVVFIYVVRVYFVQGFYIVSYGLGIYILNLLIGFLSPQIDPEIQEISDGPSLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFNVFDVPVFWPILLFYWVVLFSVTMRRQISHMIKYRYVPFTFGKQRYDGKRTTEESSSLPPRD 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00159 202 Pfam Rer1 family 26 186 IPR004932 GO:0016020
Accr10g00159 202 PIRSF AtER_Rer1p 10 197 IPR004932 GO:0016020
Accr10g00159 202 PANTHER PROTEIN RER1 17 192 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00159 Accr-Chr10 2795743 2797148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00159 1 192 Miscellaneous Gene Families AT4G39220 65.625 4.09e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00159 - - qsa:O6P43_033854 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00159 10 2795743 2797148 Accr10g00159 10 2795743 2797148 ECH