Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00072 ATGGCGGCCTTCCTAGCAAAGAGGGAGTGGAGAAAGATGTGGAATAATAATAATAATAATAATCATCATCATCATCACTCTGAAGCCTCAGACCCAATGAAACAGGATATGAGATACTTTATGGAGAGTTTTGAAGATAGGAAGAAACAAACCCCGGCGAGTGACGTCCAAAATAATCTGAAGCAAGAGATTTTACAACTTGAGATAAGATTACATGACCAATTTAAGGTGAGATGTGGATTAGAAAGAGCACTTGGGTACAAACCTTCATCTTTTGTAGATTCAAACGACTTTGTCCTGCCTGAGCCGGCAACAAAACTGATAAAAGAAATTGCAGTGTTGGAGTTGGAAGTTGCGTATTTGGAGCAACACCTTCTATCTTTGTATAGAAAAGCGTTTCATCAGCAACTATCTTTTGCAGTATCCCCATCTGCAACAAAGGACGAAAGATTGAAACTTTCTCTGAGGACTCCTCCTACTTCATTTCTTGGAGTTCCCAATAATAAGCCTAACAATTTCTCAAATAATGCAGCTAGTTCTGCACTAAGATTTAATACTCATCAGGAGCTTGAGGCTCCAGCAAGAGAGAAGCTATTTGATTCCAATATGTATCGTTGCCATTCCTCATTATCCCACAGTTCTACCTTCACAACAAGAACATCTGCGGAATCATTAGCTAAAGCTGTTTATGCCTGTCATTCTCGACAATTGGCCATGATGGAGTATCCTGAAACAGGTTCATCAAGCATGATCAGTTTGGCGGAACAACTTGGTACTCGCGTGTTTGAACATGTTCCAGATACACCTAATAGGATTTCTGAGAATATGGTGAAATGCATAGCAGCAATATATTGCAAGGTTGCAGAGCCACATATGGCATATCATGGCATATCATCTCCAAGTTCATCTTTTTCATCAATGAGTGCATTTTCCATTGAAGAACAAGGTAATATGTGGAGTCCAGGTTTCAGGAATAATTCCTTCTTTGATGTGGGCGTAGCGAATCCTTTCCAAGTGGAAGGACTACGTCACCACGTTGTGCCCTACTGCTCCATGTTCGAAGTCTCTTGGATTTACAGAGACAGTTTGAAATTAGGTGATACAGAGAATTTGCTCCAGAATTTCAGGTCTCTCACTTGTCGTTTGGAACAAGTAGATCCAGGAAAGTTGAATCATGAGGAGAAGCTGGCCTTTTGGATCAATGTACACAATGCTTTGGTGATGCATGCATTTTTGGCTCATGGGATTCCAGAAAACAATGTGAAAAGAGTTTTTCTTCTTCTGAAGGCTTCATATAATGTTGGGGGACGCCATGTTAGCGCTGATACCATACAGAACACAATCCTTGGATGTCGGATGTCTCGACCAGGCCAATGGGTTCGGTTGTTGATATCTCCATGGACCAAGTTAAGAAGTACTGGAGATAGACGAGAAGCATATGCAATAGAGCGAGCAGAACCTCTTTTACACTTTGCCCTCTGTTCAGGAAACCACTCTGATCCTGCTGTAAGAGTGTATACGGCAAAGAGAGTGAAGGAGGAGCTAGAAGTAGCAAAAGAAGAATACATAGGAGCAACGTTAGGGATAGGGAAGGAGCAAAAGATGAAATTACCAAAGCTGGTGGAGGCATTTGCGAAGGACTCAGGGTTGGGGCGCGGGGGTGTGGTACAGATGCTTCAATCACAAAGCTTCCTCACTAAACCTCACACTCCAAAATCACCACACCCCATCCAATGGATTCCCCACAACTTCTCTTTTCGATATCTCATCTCCAAGGACCTCCTCCTCCCCTACCATTCTCCACTCATATATCCTTAG 1818 0.4235 MAAFLAKREWRKMWNNNNNNNHHHHHSEASDPMKQDMRYFMESFEDRKKQTPASDVQNNLKQEILQLEIRLHDQFKVRCGLERALGYKPSSFVDSNDFVLPEPATKLIKEIAVLELEVAYLEQHLLSLYRKAFHQQLSFAVSPSATKDERLKLSLRTPPTSFLGVPNNKPNNFSNNAASSALRFNTHQELEAPAREKLFDSNMYRCHSSLSHSSTFTTRTSAESLAKAVYACHSRQLAMMEYPETGSSSMISLAEQLGTRVFEHVPDTPNRISENMVKCIAAIYCKVAEPHMAYHGISSPSSSFSSMSAFSIEEQGNMWSPGFRNNSFFDVGVANPFQVEGLRHHVVPYCSMFEVSWIYRDSLKLGDTENLLQNFRSLTCRLEQVDPGKLNHEEKLAFWINVHNALVMHAFLAHGIPENNVKRVFLLLKASYNVGGRHVSADTIQNTILGCRMSRPGQWVRLLISPWTKLRSTGDRREAYAIERAEPLLHFALCSGNHSDPAVRVYTAKRVKEELEVAKEEYIGATLGIGKEQKMKLPKLVEAFAKDSGLGRGGVVQMLQSQSFLTKPHTPKSPHPIQWIPHNFSFRYLISKDLLLPYHSPLIYP 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00072 605 PANTHER UNCHARACTERIZED 26 594 - -
Accr10g00072 605 Pfam Leucine-zipper of ternary complex factor MIP1 55 135 IPR025757 -
Accr10g00072 605 Pfam Protein of unknown function, DUF547 389 523 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00072 Accr-Chr10 1206781 1210216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00072 - - cave:132188727 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00266 9 2969236 2972654 Accr10g00072 10 1206781 1210216 CCT
Accr10g00072 10 1206781 1210216 Accr10g00072 10 1206781 1210216 ECH