Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00057 ATGAGTTCTTTGAATCTCGGAGCTTGGACTCGTCCCAGTTCTATGCTCACCCAAGTGAGCAGATCCAGATCCCCTTCTTTACTTCTCTTTAATGGTCTCAGAAAATTGCCCATTTCCTTCACACCTTCAAAATCGCCCTCCCATGGAGTTTCTTCCCCTGGTTTCCCCTCTTTTTCCGTCTCGGCGGTGCTCACCAAGGAAAACACCGTTAAGGGTTCCGAGGAGGAAAAGCCCGGTTTCAATTTCGACGCCTACATGCTTGAGAAGGCTAATAAAGTGAACCAAGCCTTGGATGAAGCTGTTGCGTTGAGAGAGCCTGAGAAGATTCACGAGGCGATGCGTTACTCGCTTCTCGCCGGCGGCAAGCGGGTGCGGCCAATGCTCTGTATCGCCGCGTGCGAACTCGTCGGCGGCAGCGAATCAGTGGCCATGCCCTCGGCTTGCGCCGTCGAGATGATTCATACTATGTCGCTGATTCACGACGACTTGCCCTGTATGGATAACGACGATCTTCGGCGAGGAAAACCGACGAATCACAAGGTATTCGGTGAGGACGTGGCGGTTTTGGCCGGCGATGCCCTTCTGTCTTTCGCTTTCGAACACATCGCCGTTGGCACCGTGGGCGTCTCGCCGACGAGGGTGGTTCGTGCCATCGGGGAGTTGGCAAAGTCGGTCGGCGCCGAGGGGCTTGTCGCCGGGCAAGTTGTGGATATAGCATCGGAGGGATTGTCCGATGTGGGAGTTGAAAAGCTTGAATTCATTCATCTCCACAAAACGGCGGCGTTGTTGGAAGCCTCCGTTGTGTTGGGAGCAATCGTGGGAGGTGGTTCAGACGAAGAAGTTGAGAAACTGAGGAAGTTCGCTAGGTACATCGGATTGCTGTTCCAGGTTGTCGACGACATACTCGACGTGACCAAATCGTCCGAGGAATTGGGGAAAACTGCAGGGAAGGATTTGGTGGCAGATAAGACCACGTATCCGAAACTTCTGGGGATAGAGAAATCTAGAGAATTCGCAGAAAAATTGAATCAGGACGCTCAGGACATGCTCTCTGGGTTTGATCCGAAGAAAGCTGCACCATTAGTTGCTTTAGCCAATTACATTGCTCACAGGCAGAACTAG 1122 0.5267 MSSLNLGAWTRPSSMLTQVSRSRSPSLLLFNGLRKLPISFTPSKSPSHGVSSPGFPSFSVSAVLTKENTVKGSEEEKPGFNFDAYMLEKANKVNQALDEAVALREPEKIHEAMRYSLLAGGKRVRPMLCIAACELVGGSESVAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHIAVGTVGVSPTRVVRAIGELAKSVGAEGLVAGQVVDIASEGLSDVGVEKLEFIHLHKTAALLEASVVLGAIVGGGSDEEVEKLRKFARYIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKTTYPKLLGIEKSREFAEKLNQDAQDMLSGFDPKKAAPLVALANYIAHRQN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00057 373 SUPERFAMILY Terpenoid synthases 84 354 IPR008949 -
Accr10g00057 373 CDD Trans_IPPS_HT 105 371 IPR000092 GO:0008299
Accr10g00057 373 ProSitePatterns Polyprenyl synthases signature 2. 291 303 IPR033749 -
Accr10g00057 373 ProSitePatterns Polyprenyl synthases signature 1. 158 174 IPR033749 -
Accr10g00057 373 FunFam Geranylgeranyl diphosphate synthase 79 373 - -
Accr10g00057 373 Pfam Polyprenyl synthetase 107 342 IPR000092 GO:0008299
Accr10g00057 373 SFLD Polyprenyl Transferase Like 84 371 - -
Accr10g00057 373 SFLD Isoprenoid Synthase Type I 84 371 - -
Accr10g00057 373 Gene3D Farnesyl Diphosphate Synthase 79 373 IPR008949 -
Accr10g00057 373 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 60 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00057 Accr-Chr10 917060 918181 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00057 K13789 - qsa:O6P43_024725 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00057 10 917060 918181 Accr10g00057 10 917060 918181 ECH