Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00039 ATGTTCCTCTTTAGAAAGCAAACCCAGAATCAAGGGGAGAATGATCCCTCCCATAAAGATGCAAAGGTGGCTGAACTGAGGGATGCTCTGGGGCCATTATCTGGGCGAAGTGAAAAGTATTGCACAGACGCATGCCTGAGGAGATATTTAGTAGCCAGAGACTGGAGCATTGATAAAGCCAAGAAAATGTTGGAAGAAACACTAAAATGGAGATCCACTTATAAGCCTGAGGAAATCCGTTGGCGTCAAGTGGCACACGAGGGTGAGACAGGAAAAGTGTGGAGAGCAAATTTTCATGATCGTTCTGGAAGAACTGTGCTTATAATGAAGCCAGCATTGCAGAACACGTCGTGTCCAGAAGATAATATCAAGCATTTAGTGTACCTCATGGAAAATGCTATCCTTAATCTCCCCGAGGGGCAACAACAGATGTCGTGGCTGATAGACTTCACTGGATTTTCACTCAACGTTAGCATTTCTGTCAAAACAGCTCGTGATATCATTAACATCTTACAAAATCACTATCCTGATAGGCTTGGTGTTGCGTTTTTGTACAACCCTCCAAGGATATTTCAAGCATTTTGGAAGGCCGTGAGATACTTCTTGGATCCCGTCACATTCCAGAAGGTAAAATTTGTTTATCCCAAGGACAAGGAGAGTGAAGAGCTGATGAAATCACTGTTTGACGAGGAAAATCTTCCCACTGAGTTTGGAGGAAAAGCAACATTGAAGTATGATCATGAAGAATTTTCAAGGATGATGATAGAAGATGATGCAAAAACTGCTAAATTCTGGGGAGTTGATGACAAGCTATTGCCCACTTGA 825 0.4255 MFLFRKQTQNQGENDPSHKDAKVAELRDALGPLSGRSEKYCTDACLRRYLVARDWSIDKAKKMLEETLKWRSTYKPEEIRWRQVAHEGETGKVWRANFHDRSGRTVLIMKPALQNTSCPEDNIKHLVYLMENAILNLPEGQQQMSWLIDFTGFSLNVSISVKTARDIINILQNHYPDRLGVAFLYNPPRIFQAFWKAVRYFLDPVTFQKVKFVYPKDKESEELMKSLFDEENLPTEFGGKATLKYDHEEFSRMMIEDDAKTAKFWGVDDKLLPT 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00039 274 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 100 245 IPR001251 -
Accr10g00039 274 MobiDBLite consensus disorder prediction 1 20 - -
Accr10g00039 274 CDD SEC14 99 240 IPR001251 -
Accr10g00039 274 PANTHER GH16843P 9 270 - -
Accr10g00039 274 Pfam CRAL/TRIO domain 98 239 IPR001251 -
Accr10g00039 274 Pfam CRAL/TRIO, N-terminal domain 40 66 IPR011074 -
Accr10g00039 274 SUPERFAMILY CRAL/TRIO domain 82 257 IPR036865 -
Accr10g00039 274 SUPERFAMILY CRAL/TRIO N-terminal domain 10 82 IPR036273 -
Accr10g00039 274 FunFam Phosphatidylinositol transfer protein 3 3 273 - -
Accr10g00039 274 Gene3D - 4 268 IPR036865 -
Accr10g00039 274 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Accr10g00039 274 SMART sec14_4 87 242 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00039 Accr-Chr10 467675 469727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00039 46 234 Acyl Lipid Metabolism Gene Families AT1G55840 24.519 6.53e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00039 K26544 - qsa:O6P43_024757 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00039 10 467675 469727 Accr10g00039 10 467675 469727 ECH