Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00038 ATGATAAAAGCCGTATTGGTGTTGAACACGCAGGGGAAGCCCCGTCTTGCCAAATTTTATGAATTTCGGCCTGTGGAGAAGCAACAGGAACTAATACGTAATGTGTTTTCAGTCTTGTGCAGTAGAGCTGAAAATGTTAGTAATTTTGTGGATGCTGAGTCCATCTATGGTCAGGATGCTCGCCTTGTCTACAAGCACTTTGCAACTTTATACTTCGTGTTCATATTTGATAGTTCTGAAAATGAGCTGGCTATGCTTGACTTAATACAAGTCTTTGTTGAAACACTGGACAAATGCTTCAGAAATGTTTGTGAACTTGACGTAGTGTACAACTATAGCAAGATGCATTCTATTCTGGATGAGATTATCATTGGAGGCCAGGTTTTGGAAACAAGTTCAACCGAGGTTATCAAGGCTATTGAAGAATTGTCAAGGTGCTCTCCCTCCCACCCATCCCCCTCCCGTTTTCTCCCTCTCCTCATATCTTTTTAA 492 0.4146 MIKAVLVLNTQGKPRLAKFYEFRPVEKQQELIRNVFSVLCSRAENVSNFVDAESIYGQDARLVYKHFATLYFVFIFDSSENELAMLDLIQVFVETLDKCFRNVCELDVVYNYSKMHSILDEIIIGGQVLETSSTEVIKAIEELSRCSPSHPSPSRFLPLLISF 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00038 163 PIRSF AP_complex_sigma 1 154 IPR016635 GO:0015031
Accr10g00038 163 Pfam Clathrin adaptor complex small chain 1 144 IPR022775 -
Accr10g00038 163 SUPERFAMILY SNARE-like 1 142 IPR011012 -
Accr10g00038 163 ProSitePatterns Clathrin adaptor complexes small chain signature. 62 72 IPR000804 GO:0006886|GO:0016192|GO:0030117
Accr10g00038 163 FunFam AP complex subunit sigma 1 155 - -
Accr10g00038 163 Gene3D - 1 157 - -
Accr10g00038 163 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 144 IPR016635 GO:0015031
Accr10g00038 163 CDD AP3_sigma 1 145 IPR027155 GO:0006896|GO:0030123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00038 Accr-Chr10 464220 466446 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00038 K12399 - tcc:18610934 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00038 10 464220 466446 Accr10g00038 10 464220 466446 ECH