Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00012 ATGGATCCACAAAAAGTGTTCTGCATGACTGGAGGAAGTGGCAACACTAGCAGCTATCAGAAACAATATATGGATCCACAAAAAGTGTTCTGCATGACTGGAGGAAGTGGCAACACCAGCTACGCCAATAACTCCTCACTTCAGAAGAAGGCATCTGACAAGGTGAAGCACATCATCATGGATACAGTTGAAAGTCTTTACCTTACAACCGCTACTAACAGCTTTGGAATCGCTGACTTGGGCTGTTCCTCTGGACCCAACACCCTTTCGTTCATCAAAGATATTTTCGAAGCTATCCAAGGAATCATCACAGACCACAACATTTCACAACCTTCACTCTCTGAGTTCAGGGTTTACCTTAACGATCTCCATACAAATGATTTCAACTCAATCATCAAGGCCCTCCCCGACTTCCACACCTTACTCAAAAACATTATTGAGTTTGATCCTCTCATTTTCATTGGAGCTTACCCCGGTTCCTTCTATGGAAGACTCTTCCCCAACAGTTGCCTCCACTTTGTCCACTCTTCTCACTGCTTGCACTGGCTTTCCGGGGTTCCTGAAGGGCTTTATGACGAGCAGGGGAGGCCAGTGAACAGGGGAAGCGTTTATATTACAGAAAGGAGTCCTGAGGCGGTGGTTGAAGCGTACTACAAGCAATTTCAGAAGGACTTTTCGTCGTTTCTGAGATCAAGGTCTGAGGAAGTGGTGGTCGGGGGAAGAATGGTGCTCATCTTTCTGGGAAGAAGAGGGCCTCAACACGTTGACAGAGGCAACTCTATCCTGTGGGAAATCCTCACACGTTCCTTTGCCACTCTGGTCTCCAAGGGGGAAGTAGAAAAGGAGAAGGTGGATTCGTATGATGTGCATTTCTACGCGGCGTCGAGGGAAGAGATAGAAGAACAAGTGAGGAAGGAAGGGTCGTTTGAGTTGGAGAGAATAGAGATATCAGAGATAGAGACAAGAGGGGTAGGGAAGGCCTCTTATGGCGCCGTACTTGCCAAAGCAATAAGGGCAATCCAACAGTCCATGATTTCCTCTCACTTCGGAGACTCCATCTTAGACTCTTTATTTGACATCTTTGCCTCCCTCGTCGATCAAGAAATCGCCCAACAGGCCATCGACCCCATCAACTATGTCCTCCTCCTCAGAAAACTATGA 1161 0.4711 MDPQKVFCMTGGSGNTSSYQKQYMDPQKVFCMTGGSGNTSYANNSSLQKKASDKVKHIIMDTVESLYLTTATNSFGIADLGCSSGPNTLSFIKDIFEAIQGIITDHNISQPSLSEFRVYLNDLHTNDFNSIIKALPDFHTLLKNIIEFDPLIFIGAYPGSFYGRLFPNSCLHFVHSSHCLHWLSGVPEGLYDEQGRPVNRGSVYITERSPEAVVEAYYKQFQKDFSSFLRSRSEEVVVGGRMVLIFLGRRGPQHVDRGNSILWEILTRSFATLVSKGEVEKEKVDSYDVHFYAASREEIEEQVRKEGSFELERIEISEIETRGVGKASYGAVLAKAIRAIQQSMISSHFGDSILDSLFDIFASLVDQEIAQQAIDPINYVLLLRKL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00012 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 385 IPR029063 -
Accr10g00012 386 Pfam SAM dependent carboxyl methyltransferase 63 385 IPR005299 GO:0008168
Accr10g00012 386 Gene3D - 29 371 IPR042086 -
Accr10g00012 386 Gene3D Vaccinia Virus protein VP39 44 320 IPR029063 -
Accr10g00012 386 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 31 369 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00012 Accr-Chr10 229893 231348 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00012 - - qsa:O6P43_024795 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00012 10 229893 231348 Accr10g00012 10 229893 231348 ECH