Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1357 ATGATGTTGTCTAAAATTGAAGCTGGTAAGAAGACAGGCGAAAGTTCGAGAGATGGGAAGCTGTTGAAAGAGATTGAAACTATTAGCAAGGCTTTGTACTTGGATAAAAGATATACAAGGAATACAGTGTCTTCTGCTAATTCTCGATCCAAGTCTGCCGGGAAGGCTCACTTGCCTGATCCTAAATCGAAGCCTGCAGCTAGTAATGAAGATCCTTCACGCAAGGATAAGAGGTCCATATGGAATTGGAGACCGTTAAAGGCCTTTTCCCATATCCGCAATCAGAGGTTTGACTGTAGTTTTTCTCTCCAAGTCCATTTGATTGAAAAGTTGCCTTCAAATTTTAATGATGCTAGCCTTAGTGTATACTGGAAGAGGCGGGATGGGGTTTTGGTGACTCGCCCATCCAAAGTAGTTGAAGGCGTGGCCGAATTTGAAGAGAAATTGACCTTCACTTGCTCAGTGTATGGCAGTAGGAGTGGGCCTCACCACTCAGCTAAATATGAAGCTAAGCATTTTTTACTCTATGCTTCTATCGTTAGTGCACCAGAACTCGATTTGGGGAAGCATAGGGTTGACCTCTCAAGGTTGCTTCCTCTTACACTGGAAGAACTTGGGGAGGAGAAGAACTCCGGGAAGTGGACTACAAGTTTTAGATTATCTGGAGTTGCCAGGGGTGCGGTAATGAATGTCAGTTTTGGGTATGAGGTGGTTGGTGATAACAGTAACGCTACCAAGGACAACCATAATGTTCCTAATGCCTTGACTACAAGGCGAAGTGTGCCAAGTTTTGCCAAGCAGTATTCTCCTCGTACTATAGATGAGGTAAAGGATCTTCATGAGGTCTTGCCCGCATCGAAGTCAGCACTGGCCAGCTCAATAGACATTCTATATCAGAAATTTGATGAAGAAAAGACAAATAGTCTAGTGCATAACAAACCTGAACTGGATGAGTGCTCTGAGAATCTTGAGCTAATCAAACCAAATGAATCTCATTTGACTGATTCTGGGAAAGAAAAATCTGACGAGTGTGTTGGCAATGATGAAAAATGCAGCCCAGTCCCTGGCAGTCCTGAAATTAATGCGTTTCAAGAAAAACTGGAGCCAGTCCAATCTGATGGTGCTGTTAATGAAAACCCTGAAGAGTGCCAAGCTAGATTTTCTGTTGTTGATCAGCACATAGAATCATCATCAAATGAACCTCTTAACTCAGAGGCATCTACCACAAAGGCTCCTGATTCTGACGTTGATACCCATGATACTGCTGGTATCCAGTTACATTCTGATGTTGATACCCATGATACTGCTGGTATCCAGTTATCCTCTGAATATGCTATAACATCTGATCCGTTGGGTGAGGAAAATGATGATTCTAAGGAGAAGGTCATGCCAAACAAATTCACTTGTGAAGACGATGATTTTATCACTAAAGAGCTGCTCATGCAAGAATTAGAATCAGCTTTAAATAGTATCTCTGATTTGGAGACAGCTGCCCTGGAATCTCCCAAAGATGAGAAATATGTTGAAACCAGGCCTGAATATAAAATGAGAAAATCACATAGTTTGGATGATGTTACAGAATCAGTTGCCAGTGAATTTTTAAGCCTGATTGGTGCTGACCATAGCCAATTTGGTTTGAGTTCTGAAAGTGAAGTTGAGTCCCCAAGAGAGCGCCTTTTAAGGCAATTTGAGAAGGAGGCTCTTGCTGAGGGTTTTTCCTTATTTGATTTTGAAATGGGTGATGATGAAGTTGATGGCGACTATAATGCTCCTGTTGAGTCTGAGCAGTGGAACTTCTCTGAGGGCCCCTCCAGGTCTTCATCACTGTTACAAGATCTTCTGCAGGAGGTGCATCCAGTTGAGTCTCAGGAAGTGAGGAGCAAACAAAGGGCTCAGATGGTAGAAGACATGGAAACAGAAGCCTTGATGCGTGAGTGGGGTTTGAATGAGGATGCCTTTAAGCATTCTCCACCGAAAGACCCTGCTGGTTTCGGAAGTCCCATTCACTCATCACCTGAAGAACCTCTTTCTTTGCCTCCTCTAGCTGAGGGTGTAGGCCCTTTTCTTCAGACAAAGGATGGGGGATTTTTACGAACTATGGATCCCTCACTTTTCAGGAATGCCAAAAGTGGTGGAAGCTTGATTATGCAAGTATCCAATCCTGTAGTGGTACCTGCAGAAATGGGTTCTGGTGTAATGGAGATTTTGCAGCGTTTGGGTTCATTGGGAATTGAAAAGCTCTCAATGCAGGCAAATAAGTTAATGCCTTTGGAGGATATCACAGGGAAAACAATGCAGCAAGTGGCGTGGGAAGCTATGCCTCTCTTGGAGGGAACCGAAAGGCAATGTCTGTCTCAGCATGATTTGGTGCCTGGGCAAGATACTAGTTCTGTGCAAAGGGGCTTGAAAGGAACATCGTCGGGACCAAAGAATACAAAGTCTGATGCAAGTTCATTAGGCAATCAAACATGTTCAGAATTCGCTTCATTGGAAGATCTTGCTCCACTGGCTATGGATAAAATTGAAGCGCTTTCAATGGAGGGTTTGAGAATACAGTCTGGGTTGTCTGATCAGGATGCACCATCGAACATCATTGCACAATCCATCGGGGATGTGTCTGCTCTCCAGGGCAAGGGGGCTGATATTAGTGGGTCGCTTGGCCTGGATGGAGCGGCAGGTTTACAGTTGTTAGATCTAAAAGACAGCAGTGATGGTGTTGAATCTGTTGATGGGATAATGGGCCTATCATTAACCCTGGATGAATGGATGAGGTTGGATTCTGGTGAGATTGGTGATGCAGAGAATATCAGTGATCATACTTCTAAACTTCTTGCTGCCCATCATGCTAACTCTTTTGAGTTCATGCGTGGGACCTTGAAGGGAGAGAAGAAGAGAGGCAAAGGAAGAAAGTGTGGTTTGTTGGGAAATAATTTCACATTAGCTTTGATGGTGCAATTGCGTGATCCTCTGCGAGACTATGAACCTGTTGGAACGCCAATGCTTGCTCTGATACAAGTTGAGAGGGTGTTTGTCCCACCAAAGCCAAGAATGTACTGCAATGTGTCGGAGATAAGGAACAATAATGACGAAGATGATGAGTGTGAAACTAGTGTTAAGTTGGAGGCAAAGGATGACAAGAAAGAAGAGAAAACCTCTGAAGAGGAGGGCATTCCTCAGTATAAGATAACTGAAGTCCATGTAGCTGGTCTGTCAACTGAACCCGAGCCTCGCAAAAAGAAGCTGTGGGGTACTTCAACCAATGAAAAATCTGGCTCCCGTTGGTTACTTGCTAATGGAATGGGGAAGAGCAATAAGCATCCAATAATGAAGTCAAAAGTTGCACCTAAATCTGGTGGTTTAACTACCACAAAAGTGCAGCCTGGTGATACATTGTGGAGCATATCATCTCGTGTTTATGGTTCTGGATCAAAATGGAAGGAATTGGCAGCTGTAAATCCTCATATCAGAAACCCCAACGTCGTCATATCAGATAAAACCATTAGATTGAAGTGA 3513 0.4367 MMLSKIEAGKKTGESSRDGKLLKEIETISKALYLDKRYTRNTVSSANSRSKSAGKAHLPDPKSKPAASNEDPSRKDKRSIWNWRPLKAFSHIRNQRFDCSFSLQVHLIEKLPSNFNDASLSVYWKRRDGVLVTRPSKVVEGVAEFEEKLTFTCSVYGSRSGPHHSAKYEAKHFLLYASIVSAPELDLGKHRVDLSRLLPLTLEELGEEKNSGKWTTSFRLSGVARGAVMNVSFGYEVVGDNSNATKDNHNVPNALTTRRSVPSFAKQYSPRTIDEVKDLHEVLPASKSALASSIDILYQKFDEEKTNSLVHNKPELDECSENLELIKPNESHLTDSGKEKSDECVGNDEKCSPVPGSPEINAFQEKLEPVQSDGAVNENPEECQARFSVVDQHIESSSNEPLNSEASTTKAPDSDVDTHDTAGIQLHSDVDTHDTAGIQLSSEYAITSDPLGEENDDSKEKVMPNKFTCEDDDFITKELLMQELESALNSISDLETAALESPKDEKYVETRPEYKMRKSHSLDDVTESVASEFLSLIGADHSQFGLSSESEVESPRERLLRQFEKEALAEGFSLFDFEMGDDEVDGDYNAPVESEQWNFSEGPSRSSSLLQDLLQEVHPVESQEVRSKQRAQMVEDMETEALMREWGLNEDAFKHSPPKDPAGFGSPIHSSPEEPLSLPPLAEGVGPFLQTKDGGFLRTMDPSLFRNAKSGGSLIMQVSNPVVVPAEMGSGVMEILQRLGSLGIEKLSMQANKLMPLEDITGKTMQQVAWEAMPLLEGTERQCLSQHDLVPGQDTSSVQRGLKGTSSGPKNTKSDASSLGNQTCSEFASLEDLAPLAMDKIEALSMEGLRIQSGLSDQDAPSNIIAQSIGDVSALQGKGADISGSLGLDGAAGLQLLDLKDSSDGVESVDGIMGLSLTLDEWMRLDSGEIGDAENISDHTSKLLAAHHANSFEFMRGTLKGEKKRGKGRKCGLLGNNFTLALMVQLRDPLRDYEPVGTPMLALIQVERVFVPPKPRMYCNVSEIRNNNDEDDECETSVKLEAKDDKKEEKTSEEEGIPQYKITEVHVAGLSTEPEPRKKKLWGTSTNEKSGSRWLLANGMGKSNKHPIMKSKVAPKSGGLTTTKVQPGDTLWSISSRVYGSGSKWKELAAVNPHIRNPNVVISDKTIRLK 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1357 1170 MobiDBLite consensus disorder prediction 42 76 - -
Acco13g1357 1170 MobiDBLite consensus disorder prediction 1 20 - -
Acco13g1357 1170 MobiDBLite consensus disorder prediction 331 347 - -
Acco13g1357 1170 Gene3D LysM domain 1111 1170 IPR036779 -
Acco13g1357 1170 MobiDBLite consensus disorder prediction 393 420 - -
Acco13g1357 1170 ProSiteProfiles LysM domain profile. 1121 1169 IPR018392 -
Acco13g1357 1170 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 94 242 IPR019448 -
Acco13g1357 1170 Coils Coil 477 497 - -
Acco13g1357 1170 ProSiteProfiles C2 NT-type domain profile. 89 237 IPR019448 -
Acco13g1357 1170 SMART LysM_2 1122 1170 IPR018392 -
Acco13g1357 1170 MobiDBLite consensus disorder prediction 329 360 - -
Acco13g1357 1170 CDD LysM 1124 1162 IPR018392 -
Acco13g1357 1170 MobiDBLite consensus disorder prediction 1028 1057 - -
Acco13g1357 1170 MobiDBLite consensus disorder prediction 393 411 - -
Acco13g1357 1170 MobiDBLite consensus disorder prediction 790 820 - -
Acco13g1357 1170 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1163 IPR039614 -
Acco13g1357 1170 Pfam LysM domain 1124 1162 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1357 Acco-ChrAcco13 13044731 13048334 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g1357 13 13044731 13048334 Acco13g1357 13 13044731 13048334 ECH