Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1274 ATGATGTTTGAAAAGCAAGGAGTGGATGGTCTTCTTAATGATTATGGTCAGCCATTAATGGCGACGAAGAAGAAGAAAAGTGATTATGATCGGAAATCAAAGACGACGATGCTGCAACAAAAACAAGAGAAGCTTGGGATTGTTGATCTCAGTGGCTTGTCCTTAGACTCTCTTCCTAACCCTTCTCTTAATCTAGCCACCATCACCAACTTAAACCTCTCCAACAACAATCTTCAGAGCATCCCGGAGTCGTTAACGGCGAGATTGCTGAACATGGCGGTGTTGGACGTTCATTCAAATCAACTAACGTCGCTTCCTAACTCCGTTGGCTGCCTCTCTAAGCTTAAGATCTTAGATGTCTCCGGCAACCTCCTGGACTCCTTACCCAAGACTATTGAGAATTGCAGAGCATTAGAAGAATTGAATGCCAATTTCAATAAGCTAACCAAGCTCCCAGAAACCATAGGGTTTGAGCTCGTCAACCTCAAGAAGCTATCAGTGAACGCCAACAAGCTTGTGTTCCTTCCTCACTCCACCTCCCACCTCACCGAACTCCGTGTTCTCGATGTTCGCCTGAATTGCCTCCGATCCCTACCGGATGACCTCGAGAATCTCATCAACCTCAAAACCCTAAATGTGAGCCAAAACTTCCAATACCTAGAAACCCTACCTTATTCAGTAGGACTCCTCTTGTCCCTCGTAGAACTCAACGTCAGCTACAACAGAATCAAGTCCTTGCCGGAGTCCATCGGCTGCCTCAAGAGGCTAGAGAAGCTAAGCGTCGAAGGGAACCCCCTGACATCGCCGCCGAAGGAGGTGGTAAAGCAAGGGGTTGACCAAGTGAAGGAATATCTGTGTCGCAAGTTGAACTCAATGCATGAGAGTCCAAAGAAGAAATCTTGGGTAGGTAAGTTGGTTAGGTATGGAACCATAAACAGACGATGTACGAGGAATAATAATGGTCATACAGATCATGATTTTGCTCTTGGACCTCAGTATCGTACCATGGAAGGTATTGGATCACCAAGGTTAATGGCCATGTTCTCTCCTAAGCGTCTCTTTTCACCTCGTCGTTCTGTGTAA 1083 0.4608 MMFEKQGVDGLLNDYGQPLMATKKKKSDYDRKSKTTMLQQKQEKLGIVDLSGLSLDSLPNPSLNLATITNLNLSNNNLQSIPESLTARLLNMAVLDVHSNQLTSLPNSVGCLSKLKILDVSGNLLDSLPKTIENCRALEELNANFNKLTKLPETIGFELVNLKKLSVNANKLVFLPHSTSHLTELRVLDVRLNCLRSLPDDLENLINLKTLNVSQNFQYLETLPYSVGLLLSLVELNVSYNRIKSLPESIGCLKRLEKLSVEGNPLTSPPKEVVKQGVDQVKEYLCRKLNSMHESPKKKSWVGKLVRYGTINRRCTRNNNGHTDHDFALGPQYRTMEGIGSPRLMAMFSPKRLFSPRRSV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1274 360 ProSiteProfiles Leucine-rich repeat profile. 232 253 IPR001611 GO:0005515
Acco13g1274 360 ProSiteProfiles Leucine-rich repeat profile. 67 88 IPR001611 GO:0005515
Acco13g1274 360 SUPERFAMILY L domain-like 45 270 - -
Acco13g1274 360 SMART LRR_bac_2 205 226 - -
Acco13g1274 360 SMART LRR_bac_2 65 84 - -
Acco13g1274 360 SMART LRR_bac_2 182 201 - -
Acco13g1274 360 SMART LRR_bac_2 253 272 - -
Acco13g1274 360 SMART LRR_bac_2 89 108 - -
Acco13g1274 360 SMART LRR_bac_2 159 178 - -
Acco13g1274 360 SMART LRR_bac_2 135 154 - -
Acco13g1274 360 SMART LRR_bac_2 230 249 - -
Acco13g1274 360 SMART LRR_bac_2 112 131 - -
Acco13g1274 360 Gene3D Ribonuclease Inhibitor 13 156 IPR032675 -
Acco13g1274 360 PANTHER - 43 288 - -
Acco13g1274 360 Gene3D Ribonuclease Inhibitor 157 290 IPR032675 -
Acco13g1274 360 Pfam Leucine rich repeat 161 216 IPR001611 GO:0005515
Acco13g1274 360 Pfam Leucine rich repeat 68 125 IPR001611 GO:0005515
Acco13g1274 360 SMART LRR_typ_2 182 205 IPR003591 -
Acco13g1274 360 SMART LRR_typ_2 159 181 IPR003591 -
Acco13g1274 360 SMART LRR_typ_2 253 276 IPR003591 -
Acco13g1274 360 SMART LRR_typ_2 65 88 IPR003591 -
Acco13g1274 360 SMART LRR_typ_2 230 252 IPR003591 -
Acco13g1274 360 SMART LRR_typ_2 89 111 IPR003591 -
Acco13g1274 360 SMART LRR_typ_2 112 135 IPR003591 -
Acco13g1274 360 SMART LRR_typ_2 136 158 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1274 Acco-ChrAcco13 11601988 11606796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g1274 3 274 Receptor kinase-like Gene Family AT5G62230 29.825 1.29e-14 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g1274 13 11601988 11606796 Acco13g1274 13 11601988 11606796 ECH