Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1262 ATGCGCTCAGGAGGTTGTGCATTACAGCAGACCCTCACATCGGAGGCTGCAACTGTGTTAAAACATTCTCTGGGCTTGGCTCGCCGGAGGGGCCATGCCCAGGTCACTCCACTCCACGTGGCAGCCACCTTGCTCAGCCTTAGAGCCAGTTCCTTCAGAAGGGCTTGTCTCAAATCTCATCCTCATCACCAAGCTTCTCCACATAATTCACAATTTCCTCTCCATTGTAGAGCCCTTGAGCTCTGTTTCAATGTGGCTCTCAATAGGCTCCCAACCACACCAACTCCAAATCTGCTTCACACCCATCACCAGCCTTCTCTTTCAAATGCTCTCATTGCTGCTCTCAAAAGAGCTCAGGCTCACCAGAGAAGGGGTTGCATAGAACAACAGAATCAGCAGCCACTTTTGACCATAAAAGTAGAGCTCGAACAGCTTGTTATCTCTATTCTTGACGACCCTAGTGTTAGCAGGGTTATGAGAGAAGCTGGGTTTTCTAGTACTGCCGTGAAGAGCAGTATAGAGGACTCTTCAGTTTCACCTCCTTGTTCTGTTTTCCAGTGTTACAGTACTTCGGGAGGCGTCTTTTCTTCTCCTTGTTCTCCTTCTCCTAGTGAAAACCAGAGGGAAACCATCAGTCCCAACAGTTTCAGGCACACTCACTTCTACACTACGGTTCCTGAGCGCTACAACACAGTTCTTTTCTCTCCTCAAAAGAGAACCCCAGTGTACCCTATCACTGAACCAGCTTTATCGAAGGAAGACATCAAGTTGATTTTGCATGTTCTCTTGAGGAAGAAGAAGAGGAATGCTGTGATAGTTGGGGATTCTGTGTCCATCACTGAAGGCCTTGTGGGAGAGTTGATGGGAAGGTTAGACAAAGGAGAGGTTCCTGATGAGTTGAAGTCAGCAAGTTTCATCAAGTTTCATCTAGCACCAGTTTCATTGAGGTCCATAAAGAGAGATGAAGTTGAAATGAACCTCTTGGAGCTGAAAAGAAAGGTGGATTCTGCTGCATCAGGAGGAGGTGGTGGTGCCATTATTTACATTGGAGATCTAAAATGGACAGTGGAGGAAACTTTCTTCAGTGAAAAAGAGGAGGGGAAAGAAGCATCTGGATATAACCCAGTGGATCATGTAATTGCAGGAATAGGTAAGTTGTTCTCTGACCATGGAAGCTCATCAAATGCTAAGGTATGGCTCATGGCAACTGCAAGTTACCAAACATACATGAGATGTCAAATGAGACAGCCTCCTCTTGAAAACCAGTGGTCCTTTCAGGCAGTTATTGTTCCTTCAGGTGGACTTGGCTTGAGCCTCCATGCTTCCAGTTTTCTTGAGTCAAAAGTGACCATTTCCCAGAACTCATCTCATATGCTGGTAAAGAAACTCTTTAATAATAAGGAGGAGCAGGATAAGCTCACTTGCTGTGAAGAATGTGCCTCTAACTATGAAAAGGATGCTCAAATGTTCAAGCCTGGCCACACCAGATTCTTGCCTTCCTGGCTTCAGTCTCATAGCATTGAGGCCCATCAGAAGGAGGAATTAACTCAATTGAGAAGAAAATGGAATAGACTATGCCAGTTTCTTCACCAAAGCAAGCATTCTCAGAACGACTGGAACAATAGTCAATACAGCAATTACAGTCCAAATGGGAAGATTTATCCCAATAATTCTTCATATCCCATGTGGTCAAAGCAAGGAAGTATTTTCCCAGATTCAAGTTGTATATCATTTGCAGACTCTGCAGCTAAATCCACTCATAGCTCCAATCTAGCACCCCAATTCCGACGCCAACAATCATGCACTATTGAGTTCAATTTTAGCAACGGAACTGAGAAACAGCAGCAAGCAACAGCTGAAGAACCGAGTTTGAAATCTCTTAAGGGCATGGAAGGTAAAGAAGTAAAGATTACTCTTGCTCTTGGGAATTCCCACTTCGGAGGTTCAGAGCAAAGAGAGGAAAAAATATCTGATAAAGCAACACAGAGAAGGGCTCATGTTTGTAAACTATTGCAGGAGAATGTGCCATGGCAATCTGAAACAATCCCTTCAATAGCAGAGGCTTTGGTTCTTGATTCCCAGTCAAAAAGGCATTACCCAACTTCGTTGATTTTGAAAGGTAATGACTCTGTAGGGAAAATAAGATTGGCTCGTGCAATTGCTGAATCGTTATTTGGTTCAGATGATCTGCTTCTTCGATTGGACATGAAGAAGGAGACCTTTGAATCTCCATCATCCGAAGTGCTGAGGAGAGCTTTGGAAGCTCATGAAGAACTCGTCGTCTTAATCGAGAACATTAATTTCGCCGACACCGATTTTAAGAAATTCCTCGGAGACATTTATGAAACAGGAAAGTTCGGCCAGGCAATATTCATAGTCACGACCGGTGGCTCAACAATGAACGAAGCAAAGAATCAGGATTCAGTGATGCAATTGACATTGCAGGTCAGCGAAACCAATCCAAACTTGCAGACACATTGCATTGTGGGCCAAAAGCGAAAAGCAGAATTCGATCTGTTCGCCAAAATCAAAACCCCGAGAACCGAAGCCAAGGAAGTTGAATCTAACAGCAAGAAAGACGTCTCGAGACAGTCAAGCTTCAACACCCTTGATCTGAACATGAAAGCCAATGAAGAAGACGGAGACGGAGACGGCGGGAGTAGCGGGAGCCCGATTTCAAGCGACTTGACCCGAGAAACCATGCCGGATTCTACAAACCGGAATGGGTTTTTGGACTCAATCAAGAACCAATTCGAGTTCAATCGAAGTCCAGCTCGAGACAGAGAAAAGGCAGAGCTATTCGCATGGAGAATCAAAGGGTGCTTTGAAGAACTTCACGGGAAGCAAAATGTGAGGAATTTCAGTATAGAAGAGAAGGTGATAGAGGAAGTAGTTGGTGGGTGTGGTAGTTTTACTAACAGAGTGTTTGAGAAATGGCTAAAAGACATTTTTCAAAGAAGCTTAGAAACAGGAAAGGAGAAAGAGGATATAGGTTTTAGACTTTGTTGCGGTGGAAATGGTAAAGGTAAAGAAGGTAAAGGAGGGGAAATTAGGGTTTTGGATAGCGGAGAAGGTGGGTTCATGAGCTCATGTCTGCCAAAGAGTATCAAAGTTAACTACTTGATGGATTGA 3132 0.4425 MRSGGCALQQTLTSEAATVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSFRRACLKSHPHHQASPHNSQFPLHCRALELCFNVALNRLPTTPTPNLLHTHHQPSLSNALIAALKRAQAHQRRGCIEQQNQQPLLTIKVELEQLVISILDDPSVSRVMREAGFSSTAVKSSIEDSSVSPPCSVFQCYSTSGGVFSSPCSPSPSENQRETISPNSFRHTHFYTTVPERYNTVLFSPQKRTPVYPITEPALSKEDIKLILHVLLRKKKRNAVIVGDSVSITEGLVGELMGRLDKGEVPDELKSASFIKFHLAPVSLRSIKRDEVEMNLLELKRKVDSAASGGGGGAIIYIGDLKWTVEETFFSEKEEGKEASGYNPVDHVIAGIGKLFSDHGSSSNAKVWLMATASYQTYMRCQMRQPPLENQWSFQAVIVPSGGLGLSLHASSFLESKVTISQNSSHMLVKKLFNNKEEQDKLTCCEECASNYEKDAQMFKPGHTRFLPSWLQSHSIEAHQKEELTQLRRKWNRLCQFLHQSKHSQNDWNNSQYSNYSPNGKIYPNNSSYPMWSKQGSIFPDSSCISFADSAAKSTHSSNLAPQFRRQQSCTIEFNFSNGTEKQQQATAEEPSLKSLKGMEGKEVKITLALGNSHFGGSEQREEKISDKATQRRAHVCKLLQENVPWQSETIPSIAEALVLDSQSKRHYPTSLILKGNDSVGKIRLARAIAESLFGSDDLLLRLDMKKETFESPSSEVLRRALEAHEELVVLIENINFADTDFKKFLGDIYETGKFGQAIFIVTTGGSTMNEAKNQDSVMQLTLQVSETNPNLQTHCIVGQKRKAEFDLFAKIKTPRTEAKEVESNSKKDVSRQSSFNTLDLNMKANEEDGDGDGGSSGSPISSDLTRETMPDSTNRNGFLDSIKNQFEFNRSPARDREKAELFAWRIKGCFEELHGKQNVRNFSIEEKVIEEVVGGCGSFTNRVFEKWLKDIFQRSLETGKEKEDIGFRLCCGGNGKGKEGKGGEIRVLDSGEGGFMSSCLPKSIKVNYLMD 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1262 1043 MobiDBLite consensus disorder prediction 848 910 - -
Acco13g1262 1043 FunFam protein SUPPRESSOR OF MAX2 1 9 179 - -
Acco13g1262 1043 Pfam Clp amino terminal domain, pathogenicity island component 140 175 IPR004176 -
Acco13g1262 1043 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Acco13g1262 1043 SUPERFAMILY Double Clp-N motif 12 174 IPR036628 -
Acco13g1262 1043 Gene3D - 9 177 IPR036628 -
Acco13g1262 1043 Gene3D - 244 432 IPR027417 -
Acco13g1262 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 666 979 IPR027417 -
Acco13g1262 1043 MobiDBLite consensus disorder prediction 887 910 - -
Acco13g1262 1043 Gene3D - 648 864 IPR027417 -
Acco13g1262 1043 ProSiteProfiles Clp repeat (R) domain profile. 8 181 IPR004176 -
Acco13g1262 1043 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 992 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1262 Acco-ChrAcco13 11301515 11305115 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g1262 13 11301515 11305115 Acco13g1262 13 11301515 11305115 ECH