Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g1257 ATGACCACCGCCGAAGCCACTGAGAACGGCGTCACCACGGCGTCGGAATCCCAACCACCTATTGTCGGATCAGACAATGCCTCCGCCACCGAACTAGCCACCGCCGCCAAGGCTACTGCTGATGCGAACGCCGCCCCGGGCAACCCGCCCAGTGAGGAGCTCGAGTCCGAGATACCTAAGGCAGACGAAGCTTCCGCCGATCAGACAGCTGCTACCACCACTAACGCTGCCACTACCATTCCACCTGAGAAGAGATGGCCGGGTTGGCCCGGGGATTGTGTGTTCCGGCTCATTGTGCCGGTACTGAAGGTAGGTAGTATTATCGGCCGGAAGGGTGAGCTCATCAAGAAGATGTGCGAGGAGACTCGAGCTCGCATTCGCGTTCTCGATGGTGCAGTGGGCACTCCGGATCGAATTGTGCTCATATCAGGGAAGGAAGAGCCAGAAGCACCTCTTTCCCCTGCAATGGATGCTGCAATAAGGGTATTTAAGCGTGTCTATGGCTTGTCTGAAGGTGATGGTGAATCAGGACCTGCTGGTGTTGCATATGTTTCTGTTCGTCTTTTGGTGGCATCAACACAGGCTATCAATTTGATTGGAAAGCAAGGTTCTTTAATTAAATCTATACAGGAGAGTACTGGTGCTTCTGCTCGTGTATTGTCTGGAGATGAGGTTCCATTTTATGCTGCTGCGGATGAGAGGATTGTAGAGTTGCAGGGAGAAGCCTTGAAGGTTCTTAAGGCTGTGGAATCAGTAGTTGGCCACCTGCGAAAGTTCTTGGTTGATCATAGTGTTCTTCCCCTTTTTGAGAAAAAAACTTACAATACAACAACCTCACAAGACCGCCAAGCAGAATCCTGGGCGGACAAGACATCTCTGCGTAGTGCTTCACAAGGTAGCATTAGTGCAGATGGACCTCTTTCAACAAAAAGGGATTCTCTCTTTGTCGAGCGTGAAACTCATTTGGATTCACAACTCCCATCCTCTGCAATGTCGCTCTATGGGCAGGATTCTTCACTTCCTAGCGTTCGTTCTTCAACATTTAGTCGTGGTGGGGCTCCCATTGTCACCAATGTGATACAAACCATGCAAATACCACTATCCTATGCGGAGGACATCATTGGGATTCAAGGGACTAATATTGCTTATATTCGCCGTACTAGTGGAGCCATACTGACTGTGCAAGAGAGTAGGGTGCCTGATGAAATTATTGTGGAGATTAAAGGCACCACAACACAAGTCCAATTGGCCCAACAGTTGATTCAGGAAGTGATAAGCAATCACAAAGAACCAGCCTCTAGCAGTTACGGCAGGTTAGATGCAGGTGGTTTAAGGTCTTCATATGCTCAGTTGGGAGGCAGTACAACCTACTCATCTTCCTCAGTGAGCGCACAGCCCTACACAGGTTATAGCTCTTCTGGTTTAGGAGGATTCGGTACTTTTAGACTCTGA 1452 0.4959 MTTAEATENGVTTASESQPPIVGSDNASATELATAAKATADANAAPGNPPSEELESEIPKADEASADQTAATTTNAATTIPPEKRWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTPDRIVLISGKEEPEAPLSPAMDAAIRVFKRVYGLSEGDGESGPAGVAYVSVRLLVASTQAINLIGKQGSLIKSIQESTGASARVLSGDEVPFYAAADERIVELQGEALKVLKAVESVVGHLRKFLVDHSVLPLFEKKTYNTTTSQDRQAESWADKTSLRSASQGSISADGPLSTKRDSLFVERETHLDSQLPSSAMSLYGQDSSLPSVRSSTFSRGGAPIVTNVIQTMQIPLSYAEDIIGIQGTNIAYIRRTSGAILTVQESRVPDEIIVEIKGTTTQVQLAQQLIQEVISNHKEPASSSYGRLDAGGLRSSYAQLGGSTTYSSSSVSAQPYTGYSSSGLGGFGTFRL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g1257 483 MobiDBLite consensus disorder prediction 279 308 - -
Acco13g1257 483 CDD KH-I_PEPPER_rpt2_like 185 257 - -
Acco13g1257 483 Pfam KH domain 186 250 IPR004088 GO:0003723
Acco13g1257 483 Pfam KH domain 361 423 IPR004088 GO:0003723
Acco13g1257 483 Pfam KH domain 95 147 IPR004088 GO:0003723
Acco13g1257 483 Gene3D K Homology domain, type 1 357 453 IPR036612 GO:0003723
Acco13g1257 483 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 179 264 IPR036612 GO:0003723
Acco13g1257 483 Gene3D - 92 260 - -
Acco13g1257 483 SMART kh_6 182 257 IPR004087 GO:0003676
Acco13g1257 483 SMART kh_6 91 164 IPR004087 GO:0003676
Acco13g1257 483 SMART kh_6 357 426 IPR004087 GO:0003676
Acco13g1257 483 MobiDBLite consensus disorder prediction 66 80 - -
Acco13g1257 483 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 85 147 IPR036612 GO:0003723
Acco13g1257 483 MobiDBLite consensus disorder prediction 1 85 - -
Acco13g1257 483 ProSiteProfiles Type-1 KH domain profile. 92 159 - -
Acco13g1257 483 MobiDBLite consensus disorder prediction 279 307 - -
Acco13g1257 483 MobiDBLite consensus disorder prediction 1 33 - -
Acco13g1257 483 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 355 428 IPR036612 GO:0003723
Acco13g1257 483 ProSiteProfiles Type-1 KH domain profile. 358 421 - -
Acco13g1257 483 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 81 442 - -
Acco13g1257 483 CDD KH-I_PEPPER_rpt1_like 92 158 - -
Acco13g1257 483 ProSiteProfiles Type-1 KH domain profile. 183 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g1257 Acco-ChrAcco13 11189272 11193770 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g1257 13 11189272 11193770 Acco13g1257 13 11189272 11193770 ECH