Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0886 ATGGCGATCTCCAGTTCAACATCTGATAGTAATGGGAACATAAGTGACTACTGTGCAACTGTGGTGTTGAACGTCTACGATCTCACTCCTCTTAACAACTACATTCATTGGATTGGATTCGGAATCTTCCACTCCGGCATTGAAGTATATGGCAGAGAGTTTGGGTTTGGAGCTCATGACTTTCCGTCAAGTGGAGTTTTTGAAGTGGAGCCAAGAAAGTGCCCTGGATTTATATATAGACGTTCCATCACTTTGGGCCAAACAAATATGCATCCTTCAGAGTTTCAGACGTTTATTGAAAATATGGCTTCAGAGTATTATGGGGATACCTATCACCTTATCTCTAAGAATTGCAATCATTTTACAGATGATCTCTCCCATAGATTGACAGGAAAGCGGATCCCTGGTTGGGTGAATCGTCTTGCCAATCTAGGTGCTGTGTGTAGCTGCCTGCTTCCTGAAAGCCTTCAAGTATCTAATGTCAAACAACAAATGCCTGAATGCCACGTCAATTTGGATGACGACGATCAAGAGACAGATGATGATCAAGAAATAAATGGCAACCAAGAAGAGAAGCACCTTCTTTCGCTGTTGCCTGGATATGAAGATGTTTCTTATGTTAAAGAGGTCCAAGCAAAATAA 642 0.4174 MAISSSTSDSNGNISDYCATVVLNVYDLTPLNNYIHWIGFGIFHSGIEVYGREFGFGAHDFPSSGVFEVEPRKCPGFIYRRSITLGQTNMHPSEFQTFIENMASEYYGDTYHLISKNCNHFTDDLSHRLTGKRIPGWVNRLANLGAVCSCLLPESLQVSNVKQQMPECHVNLDDDDQETDDDQEINGNQEEKHLLSLLPGYEDVSYVKEVQAK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0886 213 ProSiteProfiles PPPDE domain profile. 19 156 IPR008580 GO:0008233
Acco13g0886 213 Pfam PPPDE putative peptidase domain 20 154 IPR008580 GO:0008233
Acco13g0886 213 SMART DUF862_2a 19 157 IPR008580 GO:0008233
Acco13g0886 213 PANTHER DESUMOYLATING ISOPEPTIDASE 20 176 IPR008580 GO:0008233
Acco13g0886 213 Gene3D PPPDE domains 16 173 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0886 Acco-ChrAcco13 6837322 6839923 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0886 13 6837322 6839923 Acco13g0886 13 6837322 6839923 ECH