Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0858 ATGGCCTCGAGGGGTTCTGGCCTTGGAGTGAACTGGGGAACTATGGCCACTCATCAGCTTCCGCCTGAGAAGGTGGTTAAGATGCTGAAGCAAAATGGGTTTGGTAAATTGAAGCTGTTTGATGCAGACGAGTGGATCATGGCGGCTCTGATGGGGACAGATATCGAAGTTATGCTTGCAATCCCTAATAACATGTTGGAGGAGATGAGTAAGAATCCTGGAGCTGCAGATTCTTGGGTCGCTGAAAATGTGACTGGTTACTTATATCCTGGTGGAGTCAATATCAAGTTTGTTGCCGTGGGTAACGAGCCTTTCCTTAAAGCATATAATGGCTCCTATCTGCATACTACTTTCCCAGCTCTGAAGAACATACAAACATCACTCTATAATGCTGGCTTGGGTTCAAAGATTAAAGTCACAGTTCCCTTCAATTCAGACATTTATTTCTCCCCTGAATCAAATCCAGTGCCATCAGCTGGTGACTTCAGGCCTGAAATAAGAGATATCACCATTGAAATCGTCCAGTTCCTATATTCATGTGATGCCCCTCTCACTGTAAATATATACCCCTTCCTTAGTCTTTATGACAACGACAACTTCCCCATTGAATTTGCATTTTTTGAGGGAAACAGCAGGCCTCTTACAGATGGAAGTTTACTTTACAATAATGTGTTCGATGCCAATCTGGACACTCTTTTATGGGCTTTAGAAAAGGCAGGGTACCCTGACATGCAAATCCTCGTAGGGGAAGTAGGTTGGCCAACTGATGGTGATAAGAATTCTAACATTCAAAATGCAAAGAGATTCAACCAAGGTCTGCTCAAACATGTTCTGAGTGGAAATGGTACACCTAAACGGAGAGGGATCATTGACATGTATTTGTTCAGCCTCATCGATGAGAACGCAAAAAGTATTGCTCCCGGCATGTTTGAGAGGCACTGGGGGATTTTCGAGTTTGATGGGAAGCCAAAGTATGAACTAAACAAGCGTCTGGTTCCTGTGCCTGGTATAAAATATATGGAAAGACAATGGTGTGTTTTGAACACTGATGCTGGTACTAATGAACGGTTTTTGGCTCGTAGTATTGACTATGCTTGTAGTCTGTCTGATTGTACTGCTTTGGGTTATGGATCTTCTTGTAATAATCTGAGCCTACACGGGAATGCTTCTTATGCCTTCAATATGTATTATCAAGTACACAACCAAAGGGATTGGGATTGTGATTTTTCTGGTTTGGCTGTTGTAACAGATGAGGATCCATCGGAAAATGGATGCCACTTCCCAGTGATGATTTCTTATGGTTCTTCATTGATGGTGCATGGAGGGATGTCGGATATACTAAGGAACGTTGTGTGTGTGTGTACTTTGATTATGATTTTGCTATAG 1386 0.4257 MASRGSGLGVNWGTMATHQLPPEKVVKMLKQNGFGKLKLFDADEWIMAALMGTDIEVMLAIPNNMLEEMSKNPGAADSWVAENVTGYLYPGGVNIKFVAVGNEPFLKAYNGSYLHTTFPALKNIQTSLYNAGLGSKIKVTVPFNSDIYFSPESNPVPSAGDFRPEIRDITIEIVQFLYSCDAPLTVNIYPFLSLYDNDNFPIEFAFFEGNSRPLTDGSLLYNNVFDANLDTLLWALEKAGYPDMQILVGEVGWPTDGDKNSNIQNAKRFNQGLLKHVLSGNGTPKRRGIIDMYLFSLIDENAKSIAPGMFERHWGIFEFDGKPKYELNKRLVPVPGIKYMERQWCVLNTDAGTNERFLARSIDYACSLSDCTALGYGSSCNNLSLHGNASYAFNMYYQVHNQRDWDCDFSGLAVVTDEDPSENGCHFPVMISYGSSLMVHGGMSDILRNVVCVCTLIMILL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0858 461 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 416 IPR044965 GO:0004553|GO:0005975
Acco13g0858 461 FunFam Glucan endo-1,3-beta-glucosidase 5 7 331 - -
Acco13g0858 461 SMART X8_cls 343 427 IPR012946 -
Acco13g0858 461 Pfam Glycosyl hydrolases family 17 8 328 IPR000490 GO:0004553|GO:0005975
Acco13g0858 461 Gene3D - 338 430 - -
Acco13g0858 461 SUPERFAMILY (Trans)glycosidases 8 328 IPR017853 -
Acco13g0858 461 ProSitePatterns Glycosyl hydrolases family 17 signature. 244 257 IPR000490 GO:0004553|GO:0005975
Acco13g0858 461 Gene3D Glycosidases 7 332 - -
Acco13g0858 461 FunFam Glucan endo-1,3-beta-glucosidase 8 339 436 - -
Acco13g0858 461 Pfam X8 domain 343 413 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0858 Acco-ChrAcco13 6530897 6532635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0858 7 431 Miscellaneous Gene Families AT2G19440 58.333 9.57e-180 509
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0858 13 6530897 6532635 Acco13g0858 13 6530897 6532635 ECH