Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0746 ATGAGTGAGGTATTCGAAGGGTACGAGCGTCAATACTGTGAACTTTCGGCTAATCTTTCCCGCAAATGCACGGCGGCGTCTGCGCTAGATGCAGAGAAGAAGAAGCAGAAGCTTTCTGAAATCAAAGATGGACTTGATGAGGCTGACACATTGCTTCGGAAAATGGACCTTGAGGCCAGGAGCTTGCAGGCAAATATAAAGGCGACACTTCTTGCCAAGTTAAGGGAGTATAAAACTGATGTGAACAATTTTAAAAGTGAAGTAAAGAGTATCTCATCAACTAATAATACCAACCTGGCGGCACGAGATGAGCTGCTGGAGTCAGGAGATGCTGATTCACTAATGGTATCAAATGATCAAAAAGGAAGACTGTTGATGTCAACTGAGAGGTTAAACCAGTCCACAGAGAGAATAAAAGCCAGTAGAAAAACAATGCTGGAGACTGAGGAGCTTGGAGTGTCTATCCTCCAAGACCTTCATCAACAACGTCAATCGCTACTCCATGCTCATCAGACGCTCCATGGGGTAGATGAAAATATCAGCAAAAGCAAGAAGGTTTTGTCATCAATGTCAAAAAGAATGAGCAGGAATAAATGCATTGTTGGCTCCTTCATCATAGCTCTGGTCCTAGCAATTTTATTGATCTTGTATTTTAAGCTGACTCGCTAG 669 0.429 MSEVFEGYERQYCELSANLSRKCTAASALDAEKKKQKLSEIKDGLDEADTLLRKMDLEARSLQANIKATLLAKLREYKTDVNNFKSEVKSISSTNNTNLAARDELLESGDADSLMVSNDQKGRLLMSTERLNQSTERIKASRKTMLETEELGVSILQDLHQQRQSLLHAHQTLHGVDENISKSKKVLSSMSKRMSRNKCIVGSFIIALVLAILLILYFKLTR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0746 222 CDD SNARE_Vti1 128 189 - -
Acco13g0746 222 FunFam Vesicle transport through interaction with t-SNAREsB 118 198 - -
Acco13g0746 222 Coils Coil 45 65 - -
Acco13g0746 222 Gene3D - 1 98 IPR038407 -
Acco13g0746 222 Pfam Snare region anchored in the vesicle membrane C-terminus 129 194 - -
Acco13g0746 222 Gene3D - 118 198 - -
Acco13g0746 222 SUPERFAMILY SNARE fusion complex 131 190 - -
Acco13g0746 222 FunFam Vesicle transport through interaction with t-SNAREs homolog 1A 1 100 - -
Acco13g0746 222 Coils Coil 67 87 - -
Acco13g0746 222 PIRSF Membrin-2 1 219 IPR027027 GO:0005484|GO:0005794|GO:0016192
Acco13g0746 222 Pfam Vesicle transport v-SNARE protein N-terminus 12 89 IPR007705 GO:0006886|GO:0016020
Acco13g0746 222 SUPERFAMILY t-snare proteins 6 91 IPR010989 GO:0016020|GO:0016192
Acco13g0746 222 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0746 Acco-ChrAcco13 5547003 5548871 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0746 13 5547003 5548871 Acco13g0746 13 5547003 5548871 ECH