Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0709 ATGGCCGCAATCGCAAACGGCGAGTTATTCAGCATTCACACAAATGTGTTACCCTCTCTCTGGCAATTGCGATTACAACTAGAAGGGAGGGAGAGAATCTTGACCTTTGTGATTTGTGAAGCACTTCGCTCTCTGGGCTGGGGCGTCGTCTGCAGGCGTAATCGAAAGCTGCGCATAGTCCACTCGCTCTCTCTGTGGAATTTATCAATAATTTCCAACAGAATGTTGGAGGGTCCATCCTTTCTTGTTGTAAGGGAGTTACCAAGCTCATGTGAGGAAGAGAGCAGGTGGATTTATAATACCATTCATGTAATGGAGCTCTCAAACAACAAGCGCAGGCTGGAACATGAAGGACAGGTGGTGTTAGGGAAGTCCTGCAAACGTTCAGATGCTCCTGACGAAGCAGGAGAAACATGGTTGAGGGTGCGTGACCTTTCCCTTTCCCATGACCAAATAAATGACCAAAATCATGATCAGTCAGATTCTAGCTCACTTATCCACCAACTTGGGCGGGATATGTCAATTAACTGTCTCCTCCGATGCTCAAGGGCTGATTATGGTTCAATTGCCTCAGTGAATCAGAATTTTCGATCTCTTATTCGAAGTGGAGAACTATATAAACTCAGGCGGCAGTTTGGTATTATAGAACATTGGGTTTACTTCTCTTGCAATCTCCTCGAATGGGAGGCATTTGATCCAAACAATGGTCGATGGATGCGCTTGCCTGGAATGACTTGTAATGAATGCTTTATGTGTTCGGACAAGGAGTCACTTGCTGTTGGTACGGAACTTTTGGTGTTCGGAAAGGAAATCATGTCTCCTGTTATTTACAAATACAGCATATTGACAAACTCATGGTCATCTGCTAAAGAAATGAATACTCCTAGATGCTTGTTTGGTTCTGCAAGCCTTGGTGAAATAGCCATACTGGCTGGTGGCTGTGACCCGCGGGGCAACATCTTAAGTTCAGCTGAGCTTTACAACTCAGAAACTGGAGATTGGGAGACTCTTCCAAACATGAACAGAGCAAGGAAAATGTGCTCTGGTGTATTTATGGATGGAAAATTTTATGTCATTGGGGGCATTGGAGTAGGCAACACAAGACAGTTGACATCCGGTGAGGAGTTTGACTTACAGACAAGGAAATGGCGTGAAGTACCCAACATGTTCCCTGGTCGATACGGAGGGGCTGGGATTGCTGAGGCGCCAGCTGCTGCTGAGGCACCTCCTTTAATTGCAGTTGTAAATAATGTATTGTATGCAGCAGATTATGCTCTACAGGAGGTAAGGAGGTATGATAAAGTCAGGAATTTATGGGTCACCATCGGAAGGCTGCCTGAGCGGGCTGCTTCAATGAATGGTTGGGGATTAGCTTTTCGGGCATGTGGAGATAGGCTAATTGTTATTGGTGGGCCGCGGGATTTAAATGTGAGGGCAATAGAAGTTAATGCTTGGATCCCTGGGGAAGGCGAACCACAGTGGAACCTGTTGGCCAGCAGGCAATCTGGGAGCTTTGTGTATAATTGTGCTGTGATGGGATGCTGA 1545 0.4608 MAAIANGELFSIHTNVLPSLWQLRLQLEGRERILTFVICEALRSLGWGVVCRRNRKLRIVHSLSLWNLSIISNRMLEGPSFLVVRELPSSCEEESRWIYNTIHVMELSNNKRRLEHEGQVVLGKSCKRSDAPDEAGETWLRVRDLSLSHDQINDQNHDQSDSSSLIHQLGRDMSINCLLRCSRADYGSIASVNQNFRSLIRSGELYKLRRQFGIIEHWVYFSCNLLEWEAFDPNNGRWMRLPGMTCNECFMCSDKESLAVGTELLVFGKEIMSPVIYKYSILTNSWSSAKEMNTPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSETGDWETLPNMNRARKMCSGVFMDGKFYVIGGIGVGNTRQLTSGEEFDLQTRKWREVPNMFPGRYGGAGIAEAPAAAEAPPLIAVVNNVLYAADYALQEVRRYDKVRNLWVTIGRLPERAASMNGWGLAFRACGDRLIVIGGPRDLNVRAIEVNAWIPGEGEPQWNLLASRQSGSFVYNCAVMGC 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0709 514 Gene3D - 210 499 IPR015915 GO:0005515
Acco13g0709 514 Pfam Kelch motif 343 389 IPR006652 GO:0005515
Acco13g0709 514 Pfam Kelch motif 295 341 IPR006652 GO:0005515
Acco13g0709 514 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 154 514 - -
Acco13g0709 514 FunFam F-box/kelch-repeat protein SKIP11 211 499 - -
Acco13g0709 514 SMART kelc_smart 263 306 IPR006652 GO:0005515
Acco13g0709 514 SMART kelc_smart 307 354 IPR006652 GO:0005515
Acco13g0709 514 SMART kelc_smart 355 403 IPR006652 GO:0005515
Acco13g0709 514 SUPERFAMILY Kelch motif 224 511 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0709 Acco-ChrAcco13 5226655 5229078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0709 169 445 Miscellaneous Gene Families AT4G33900 24.921 1.85e-12 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0709 13 5226655 5229078 Acco13g0709 13 5226655 5229078 ECH