Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0608 ATGAGCTTTTATGTAATAAAAGATGCTATTGCAATAGATGGTATCATCTATGTAATGAATAGTCGAGCCAGTGGATATGCGGTCATTTTGACCAATGATTTCATTCCAAAAGGGAAGCTCTTTGAATCTCGTAGTGGATATGACTGTGTGCATTTGTTTAATATGGAGGAAGAAGCCTGGGAGAGTAAGAGGATCGGAATCTACCGGAGAATGCTGAGGCTAGTTTCGAAGAGAATTTTGGGAGCAGCGTCGCGGGAGGCACCGGCGCCGACGATCCAGGTTCTTCCCCGATTCTACCATGAGAGGGTTGTTGACCACTACAACAACCCACGGAATGTTGGATCCTTCGACAAGAATGACCCCACCGTCGGCACAGGGCTGGTTGGGGCACCTGCATGTGGCGATGTCATGAAACTCCAAATTAAGGTTGATGAAAAGACCGGAAACATTGTTGATGCTTGCTTCAAGACCTTCGGCTGTGGTTCGGCTATTGCGTCTTCATCTGTGGCTACTGAATGGGTGAAAGGAAAGCAAATGGAAGAAGTTTTATCCATTAAAAATACTGAAATTGCAAAGCATCTATCACTTCCTCCAGTTAAGCTTCACTGCAGCATGCTTGCTGAGGATGCCATCAAAGCGGCTGTTAAAGACTATGAAGCTAAGCGTGCCAAGTCAACTTCCACTGAGTCAACGTCTGAAGAGAAGGCTGCCACTGCTTAA 720 0.4597 MSFYVIKDAIAIDGIIYVMNSRASGYAVILTNDFIPKGKLFESRSGYDCVHLFNMEEEAWESKRIGIYRRMLRLVSKRILGAASREAPAPTIQVLPRFYHERVVDHYNNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDEKTGNIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKSTSTESTSEEKAATA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0608 239 NCBIfam Fe-S cluster assembly scaffold IscU 99 222 IPR011339 GO:0005506|GO:0016226|GO:0051536
Acco13g0608 239 SUPERFAMILY SufE/NifU 98 225 - -
Acco13g0608 239 Pfam NifU-like N terminal domain 99 223 IPR002871 GO:0005506|GO:0016226|GO:0051536
Acco13g0608 239 Gene3D - 98 239 - -
Acco13g0608 239 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 74 230 IPR002871 GO:0005506|GO:0016226|GO:0051536
Acco13g0608 239 FunFam Iron-sulfur cluster assembly protein 99 238 - -
Acco13g0608 239 CDD IscU_like 99 214 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0608 Acco-ChrAcco13 4403622 4408413 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2574 04 42622209 42623665 Acco13g0608 13 4403622 4408413 CCT
Acco13g0608 13 4403622 4408413 Acco13g0608 13 4403622 4408413 ECH