Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0595 ATGGCTGAATCCTCTTCTTCTCTACAGTGGAACTATTATCAGATCTTAAGCCAAAGTAACCCCGATTACAATATTGTCAAGGACGATTGCATAACAACGATTCAATTCGAGAAGCGTGGTCAATATCTAGCTACTGGAGATCAAGGAGGACGAGTTGTGATTTTTGAAAGAGATGATGATAGAAAGATTGAAGCGTCAAGTCGGGAAAAAATGGATTACGCTCCTGACCAACGTCCTAAATTTCGGTTTAAGACAGAATATCACAGTCACCATCGTAAATTTGATCCGTTGAGTGATGAGGTAGTGTCAGCGAGGATTAACAAAGTGAGCTGGTGCGTTGCAGAGAAAGGACGGTTGATGCTTCTCTCAGCAAATGATAAGAAAATTAAATTATGGACGATTAAGGAGTATGAATTAGATGGATCTGAACAAGCGATTCCTCTTGGACCTCCTCGATTCTTAAGCTCAGAAAATGTTCTATTATCTAAAAAGTGTTCCGAGAGTGGAAAAGAAGCCTCGTCTTCTGCTAGTGGAGGTCATTTGGAGTGGACAGAGAACCTATTTCAGGAAGAATATCCACCACCTGAAGATAATGATGATAATGACGAGGACGTAGGACCAGGTAAAACTTTTCATACTGCAAAATGCAAAAAGGTGTATGCTGAAGATAACAGCGATCATATTCACTCCATTTCGAATAATAGTGATGGCCAGACATTTATCTCAGCTGAGGAATATAAAATCAATTTATGGAATCTTGATTTCAATGATTGTAGTTTCAATCTCGTCGAAATGAAACCATGGGAGACAGAGGAGAGGATAACATCAGCTGAATTCCATCCAGTAAACTGCAACTTTCTGGCTTATGGCAGCTCACGTGGTCGTATTTGTATATCTGACATGAGACAAGCATTAAGATGCGATAATAGTGCTAGCGTGTTTCTTGATCCATCACTCTCATACTTGAATCACCCTTATGAGAAAAGAGCTTCACACATCTCTGATGTAAAATTTCTGGCTGATGATGGCATTGGTGGGATACAGTTTATAAGTCGTGACCACATGAATATGAAGCTTTGGGACATGCGCATGGATCGTCCAATTGAAATATATGGAGTTCATGATCAACTGCACCCTAGAATTGCCGAGATGTATGACTACGGCCTAATGCCGGCTCAATTTGATTGCTGCTCTAGAAGAGATGGATTTTGTTTTGCAACTGGGTCTTTCAGTCATCGCTTGAAGATATTCTCCATGGAGGATGAGAGTGTGCAAGACATCAAACTGGATGTAATTGCAAATTTTGCCAGGCAGGGGAGGCATACTCTACCTAGATGGGCGGTTAGAAGGTCGTCTATAATAGACTATATTAGACCTGCTGGGTTGGATCAAGGAGGTGCTGGTGACATAAACGAGGACTTGTTTTTTGCTAGGGACACTAAGCTATTGCGTGTTGCTTGGCATCCAACAACCAATCTAGTGGCTGCTGCACTTAAAGGAAACTTGATATTCTATCACGTATAATTTCATGATCCATCACTCTCAAACTTGAATCTCCCACATTTGCAAAGATCTTCCTGGATCTCTGATGTAAAATTTCTGGCTGGTGATGGCATTGGCGGGAAACAGCTTATAAGTCGTGATTACATGGATATGAAGATTTGGGACATGCGCATGGATGCTCTACCAATTGCAATATATGGAGTTCATGAGCACCTGCGCCCAAGAATGGCCGAGATATACGACTACGACCGCATGTCGAGTCAATTTGACTGCTGCTCTAGAAGTGACGGACTTTGTTTAGCAACTGGTTCTTACAGCCATGGGATGCCTAATCTGCCTAATGGGACGGTTAGAAGGTGTCCTACAACGGACTACTTTGCAGCTGCAGGGTTGGATCAAGGTGGTGACATAGACGATGACTTAATTTTTGGCAGGGACTCCAAGTCCAAGCTGTTCCGTGTTGGTTGGCATCCAACATCCAATCTAGTGGCTGGTGCAGTTAAAAACGACTTGATATTCTATCATGTATAG 2034 0.4208 MAESSSSLQWNYYQILSQSNPDYNIVKDDCITTIQFEKRGQYLATGDQGGRVVIFERDDDRKIEASSREKMDYAPDQRPKFRFKTEYHSHHRKFDPLSDEVVSARINKVSWCVAEKGRLMLLSANDKKIKLWTIKEYELDGSEQAIPLGPPRFLSSENVLLSKKCSESGKEASSSASGGHLEWTENLFQEEYPPPEDNDDNDEDVGPGKTFHTAKCKKVYAEDNSDHIHSISNNSDGQTFISAEEYKINLWNLDFNDCSFNLVEMKPWETEERITSAEFHPVNCNFLAYGSSRGRICISDMRQALRCDNSASVFLDPSLSYLNHPYEKRASHISDVKFLADDGIGGIQFISRDHMNMKLWDMRMDRPIEIYGVHDQLHPRIAEMYDYGLMPAQFDCCSRRDGFCFATGSFSHRLKIFSMEDESVQDIKLDVIANFARQGRHTLPRWAVRRSSIIDYIRPAGLDQGGAGDINEDLFFARDTKLLRVAWHPTTNLVAAALKGNLIFYHVXFHDPSLSNLNLPHLQRSSWISDVKFLAGDGIGGKQLISRDYMDMKIWDMRMDALPIAIYGVHEHLRPRMAEIYDYDRMSSQFDCCSRSDGLCLATGSYSHGMPNLPNGTVRRCPTTDYFAAAGLDQGGDIDDDLIFGRDSKSKLFRVGWHPTSNLVAGAVKNDLIFYHV 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0595 677 SMART WD40_4 80 133 IPR001680 GO:0005515
Acco13g0595 677 SMART WD40_4 213 252 IPR001680 GO:0005515
Acco13g0595 677 SMART WD40_4 18 56 IPR001680 GO:0005515
Acco13g0595 677 SMART WD40_4 261 300 IPR001680 GO:0005515
Acco13g0595 677 SMART WD40_4 364 418 IPR001680 GO:0005515
Acco13g0595 677 Gene3D - 161 425 IPR015943 GO:0005515
Acco13g0595 677 Gene3D - 2 157 IPR015943 GO:0005515
Acco13g0595 677 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 526 675 IPR000009 GO:0000159|GO:0019888
Acco13g0595 677 SUPERFAMILY WD40 repeat-like 396 676 IPR036322 GO:0005515
Acco13g0595 677 SUPERFAMILY WD40 repeat-like 29 424 IPR036322 GO:0005515
Acco13g0595 677 MobiDBLite consensus disorder prediction 170 210 - -
Acco13g0595 677 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 252 279 IPR000009 GO:0000159|GO:0019888
Acco13g0595 677 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 391 417 IPR000009 GO:0000159|GO:0019888
Acco13g0595 677 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 365 390 IPR000009 GO:0000159|GO:0019888
Acco13g0595 677 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 80 108 IPR000009 GO:0000159|GO:0019888
Acco13g0595 677 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 476 505 IPR000009 GO:0000159|GO:0019888
Acco13g0595 677 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 109 137 IPR000009 GO:0000159|GO:0019888
Acco13g0595 677 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 35 55 IPR000009 GO:0000159|GO:0019888
Acco13g0595 677 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 224 251 IPR000009 GO:0000159|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0595 Acco-ChrAcco13 4316606 4324065 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0595 13 4316606 4324065 Acco13g0595 13 4316606 4324065 ECH