Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0593 ATGAAGAAGCGTATGTTAGTCAGAAAATCTACAATGGGTAGCCTTTGGATATGCCATTTCTTTCTGTTTCTGACCATGCTCAATGCTTCTTTCGTCACAGTAGTTCTTGGCGATAATGTCTCAGATTCTTACTGGCTTCTTAAAATGAAATCAAAACTTGTTGACCCTTTAGGAGCTCTAAAAGATTGGTCTCCAATTCTTCCTATGTGTAGCTGGTATGGAGTAACATGTTCACTTGATCAGTCTCATGTTATTGGCCTGAACTTGTCTGGTTCAGGAATATCTGGTTCCATGTCAATTGAGCTCATCACCCACCTCACTTCTCTTCAAACACTTGATTTGTCTTCAAATTCCCTCACTGGTTCTATTACTTCTGAGGTTGGGGTGCTACAGAATCTAAGAATACTTCAACTTTTCGCGAATTATCTATCTGGCACTATTCCTGCAGAGGTAGGTAATTTGAAGAAGTTGGAGATTCTCAGAATAGGTGACAACTTGTTGGCAGGTGAAATCACACCAAGTATAGGTAACTTGAAGGAGTTGAAGGAGTTGGGTTTAGCTTTCTGCTATTTTAATGGAAGCATACCTACTGAGATTGGAAGCTTGAAGAATCTAGTTTCTCTTGATTTGCAGATGAATGGTCTAGAGGGTCACATACCCAAAGAAATTCAAGGCTGTGAAAAGCTGCAAAATTTTGCAGCATCAAACAACTTGCTTGAAGGAGACATACCTTCTTCTTTAGGGTCTCTTGTATCATTGCAAATTCTGAACCTAGCCAATAATAGTCTCTCTGGGTCAATTCCCTCTAGCTTGAGCCATCTCTCCAAGTTGAAATACCTGAATTTGCTTGGAAACAAACTAAGTGGGAAAGTTCCTTCAGAACTTAACAGTTTGAATCAGCTTCAGAAGCTAGACTTGTCCAAAAACAACCTTTCTGGACCAATAAACCTCTTTAATTCCAAACTAAAGAGTCTCCAAACTCTGGTTCTGTCTGATAATTTTTTCACAGGTAATATCCCAGCCAACTTCTGCTACAGTGGTTCCAAACTTGAGCAACTTTTCTTAGCTCGGAATAAACTTTCTGGTAACTTCCCCTTGGAGTTACTCAGTTGCTCCTCACTTCAACAATTGGATCTTTCTGATAACAGATTTGAAGGTGAACTTCCAACAACCTTAGACAAACTTCAGAATCTCACAGATCTTGCTCTCAACAACAACAGCTTCACAGGATCTCTACCTCCGGAAATTGGAAACATGAGTACCTTGGAGGGCCTCTTCTTGTTTCATAACACGTTCACAGGAAAAATTCCAGTGGAGTTTGGAAGGCTTCAGAGGTTGAAAACCATATACCTTTATGATAACCAGATGTCAGGTCCAATACCAAGAGAGCTAACAAACTGCACAAGCTTAAGGGAAATTGACTTCTTTGGGAACTTTTTCTCTGGGCCCATTCCAGAGACCATGGGTAAGCTCAAGGACTTGGTTCTGCTTCAGCTAAGGCAGAATGACTTGTGGGGTCCTATACCTCCAAGTATGGGGTACTGTAAAAGTCTTCAGTTATTGGCATTAGCAGATAATAAATTGTCTGGTTCTATACCACCCACATTCAGTTACCTTTCAGAACTTAGAACCATTACCCTTTACAATAACTCTTTTGAAGGACCACTTCCAGAGTCACTCTTGCTTCTCAAAAACCTGAAAATCATAAATTTTTCTCATAACAGGTTCAGTGGAACCATCCTTCCTCTCACTGGTTCACATTCTCTGAATGCTCTGGACTTGACTAACAATAGCTTCTCTGGTTCCATCCCTTCAAGCCTAGCCATGTCAAGAAATCTCAGCCGTCTAAGACTCGCGCATAACCAACTCACAGGAGGCATTCCGTCTGAATTTGGTCAGGTCATTGAACTCAACTTCCTTGATTTGTCTTTTAACAATTTGACAGGAGAGGTAGCACCTGAACTCTCGAACTGTAAAAAGATCCAACACTTTCTACTCAATAATAACAGATTGAAAGGGAAAATGCCTTCTTGGTTGGGAAGTTTCCAACAACTTGGTGAGCTGGATCTCTCATTCAATGACCTCCATGGAAGCGTACCGTCTGAGCTTGGAAACTGTTCAAATTTGCTGAAGCTTTCTCTGCATCACAACAATCTCTCTGGTGAAATACCACAAGAGATTGGAAATCTTACTTCCCTCAATGTCCTTAACTTGCAAAGCAATCATTTCTCAGGTCTCATTCCTTCATCAATTCAGCAATGCAATAAGCTATATGAACTCAGGCTCTCGGAAAACCTCTTCACAGGCGATATACCAGACGAGCTAGGAGAACTTACAGAACTACAAGTGATATTGGACTTGAGCAAAAACCTCTTATCTGGGAAAATCCCATCTTCACTGGGAAACCTCATGAAGATAGAAAGACTCAATCTTTCTTTCAATAATCTTCAAGGACAAGTTCCTCCTTCTCTTGGGAAACTAACAAGCATTCACATGCTGAATATCTCGTATAACCATCTACAAGGCCAGATTCCTCCAACATTCTCAGAGTTCCCACTAAGCTCCTTCATGAACAATGACCACTTGTGTGGCCCACCATTGGTATCGTGTTCGGGATCTAAAGGACAAGATCAAGTGGTGCTGTCTAACAAAGAAGTGGCTGCAATCATAGTGGCCATTGTGTTTACTTCTACTTTGATATGCTTAGTGCTGTTGCATATTATGGTGAGAATTTGGTGTAACTGGAGGAAAGTTGCGATTTCAAGTGCTGATGGAGGCACTGGTGAGAGAAAGAGAGAGGAGGCTAGATGGATGTATAGTGATAAGAAAACAAGAAATGGAGAGTATTGGAATATGAACACTTTAGGGTTTAGTACTCCTTCACCGAATAAGCAGAGTCCAGATCAATCAACGGCTTGA 2919 0.4094 MKKRMLVRKSTMGSLWICHFFLFLTMLNASFVTVVLGDNVSDSYWLLKMKSKLVDPLGALKDWSPILPMCSWYGVTCSLDQSHVIGLNLSGSGISGSMSIELITHLTSLQTLDLSSNSLTGSITSEVGVLQNLRILQLFANYLSGTIPAEVGNLKKLEILRIGDNLLAGEITPSIGNLKELKELGLAFCYFNGSIPTEIGSLKNLVSLDLQMNGLEGHIPKEIQGCEKLQNFAASNNLLEGDIPSSLGSLVSLQILNLANNSLSGSIPSSLSHLSKLKYLNLLGNKLSGKVPSELNSLNQLQKLDLSKNNLSGPINLFNSKLKSLQTLVLSDNFFTGNIPANFCYSGSKLEQLFLARNKLSGNFPLELLSCSSLQQLDLSDNRFEGELPTTLDKLQNLTDLALNNNSFTGSLPPEIGNMSTLEGLFLFHNTFTGKIPVEFGRLQRLKTIYLYDNQMSGPIPRELTNCTSLREIDFFGNFFSGPIPETMGKLKDLVLLQLRQNDLWGPIPPSMGYCKSLQLLALADNKLSGSIPPTFSYLSELRTITLYNNSFEGPLPESLLLLKNLKIINFSHNRFSGTILPLTGSHSLNALDLTNNSFSGSIPSSLAMSRNLSRLRLAHNQLTGGIPSEFGQVIELNFLDLSFNNLTGEVAPELSNCKKIQHFLLNNNRLKGKMPSWLGSFQQLGELDLSFNDLHGSVPSELGNCSNLLKLSLHHNNLSGEIPQEIGNLTSLNVLNLQSNHFSGLIPSSIQQCNKLYELRLSENLFTGDIPDELGELTELQVILDLSKNLLSGKIPSSLGNLMKIERLNLSFNNLQGQVPPSLGKLTSIHMLNISYNHLQGQIPPTFSEFPLSSFMNNDHLCGPPLVSCSGSKGQDQVVLSNKEVAAIIVAIVFTSTLICLVLLHIMVRIWCNWRKVAISSADGGTGERKREEARWMYSDKKTRNGEYWNMNTLGFSTPSPNKQSPDQSTA 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0593 972 ProSiteProfiles Leucine-rich repeat profile. 252 275 IPR001611 GO:0005515
Acco13g0593 972 Pfam Leucine rich repeat N-terminal domain 42 78 IPR013210 -
Acco13g0593 972 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 485 581 - -
Acco13g0593 972 Gene3D Ribonuclease Inhibitor 195 290 IPR032675 -
Acco13g0593 972 SMART LRR_typ_2 778 803 IPR003591 -
Acco13g0593 972 SMART LRR_typ_2 563 588 IPR003591 -
Acco13g0593 972 SMART LRR_typ_2 322 346 IPR003591 -
Acco13g0593 972 SMART LRR_typ_2 106 130 IPR003591 -
Acco13g0593 972 SMART LRR_typ_2 395 419 IPR003591 -
Acco13g0593 972 SMART LRR_typ_2 250 274 IPR003591 -
Acco13g0593 972 SMART LRR_typ_2 154 178 IPR003591 -
Acco13g0593 972 SMART LRR_typ_2 202 225 IPR003591 -
Acco13g0593 972 SMART LRR_typ_2 298 320 IPR003591 -
Acco13g0593 972 SMART LRR_typ_2 682 706 IPR003591 -
Acco13g0593 972 SMART LRR_typ_2 634 658 IPR003591 -
Acco13g0593 972 SMART LRR_typ_2 730 753 IPR003591 -
Acco13g0593 972 SUPERFAMILY L domain-like 64 387 - -
Acco13g0593 972 Gene3D Ribonuclease Inhibitor 584 879 IPR032675 -
Acco13g0593 972 Gene3D Ribonuclease Inhibitor 291 388 IPR032675 -
Acco13g0593 972 SMART LRR_sd22_2 106 129 - -
Acco13g0593 972 SMART LRR_sd22_2 202 228 - -
Acco13g0593 972 SMART LRR_sd22_2 154 180 - -
Acco13g0593 972 SMART LRR_sd22_2 298 327 - -
Acco13g0593 972 SMART LRR_sd22_2 274 297 - -
Acco13g0593 972 SMART LRR_sd22_2 443 475 - -
Acco13g0593 972 SMART LRR_sd22_2 371 400 - -
Acco13g0593 972 SUPERFAMILY L domain-like 345 671 - -
Acco13g0593 972 Gene3D Ribonuclease Inhibitor 40 194 IPR032675 -
Acco13g0593 972 Gene3D Ribonuclease Inhibitor 486 583 IPR032675 -
Acco13g0593 972 Gene3D Ribonuclease Inhibitor 389 485 IPR032675 -
Acco13g0593 972 PANTHER POLYGALACTURONASE INHIBITOR 1 758 864 - -
Acco13g0593 972 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Acco13g0593 972 Pfam Leucine rich repeat 324 384 IPR001611 GO:0005515
Acco13g0593 972 MobiDBLite consensus disorder prediction 953 972 - -
Acco13g0593 972 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 39 196 - -
Acco13g0593 972 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 582 874 - -
Acco13g0593 972 FunFam Uncharacterized protein 389 484 - -
Acco13g0593 972 PRINTS Leucine-rich repeat signature 109 122 - -
Acco13g0593 972 PRINTS Leucine-rich repeat signature 298 311 - -
Acco13g0593 972 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 292 388 - -
Acco13g0593 972 SUPERFAMILY RNI-like 592 850 - -
Acco13g0593 972 FunFam Uncharacterized protein 197 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco13g0593 Acco-ChrAcco13 4297221 4300139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0593 55 871 Receptor kinase-like Gene Family AT5G46330 34.424 1.05e-128 416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0593 13 4297221 4300139 Acco13g0593 13 4297221 4300139 ECH