Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco13g0530 ATGCCCGAACCAGTGGAACCTCAGAATCATGTTCTGCTTCCAAAACCGGAGTTGGGAGCAGCAGAGAGCTCCAAGGTTCTCCAGCCTCCGAAGTTCGTCGTCTTGGCTGACCTCAACGTCGATCCTCCGGAAGCAGACGAGGATGATGATTCCCCCCATGTGCCTCCGCCAGAAATTACCATGTTAACAAATGAAAAAAGTCAAGAGAAGAGTGCATTGTCCAAAGACGCTGACAGTGCTGATGGTGAAAGTAAAAAATTGCACAAACTGGGGAAGTGCCGTTCCAGATTTAGTAAGACAGATTCTTCTGTTGATTGCGGAGCTGATGGAGATGGTGATCAGCATGTTCAAGGGGTCGCTTCCTCTCGAGAGGAAAAAGTTAGCAGTCTGAAGACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCGCATGCTCATTTCATACTCGGCCTAATGTACCAAAGGTTGGGCCAACCTCAAAAGGCTCTATCGGCATATGAGAAGGCTGCAGAGATCTTACTTCGGTCTGAGGCTGAGATTAGTCGGCCGGAGTTGCTTTCTTTAGTTCAAATTCACCATGCACAGTGCCTGATACTAGAAAGTGCAGTGGAAAATAGTTCAGATAAAGAACTTGAACCTCAAGAACTTGAGGAAATTCTCTCCAAACTAAAGGAATCTGTGCAGTCAGATATCAGGCAGGCAGCTGTATGGAATACCCTAGGATTTGTACTTCTTAAAACAGGTCGTTTGCAGAGTGCAATCACAGTACTGTCATCACTGTTGGCTATTGCACCTGACAACTATGATTGCCTGGAAAATCTTGGGATTTCTTATCTTCAAAGTGGGAATTTGGAATTATCTGCAAAATGTTTCCAAGAGTTGATTCTAAAAGATCAAAATCATCCTGCAGCTTTAATCAACTATGCTGCCCTTCTTTTATGTAAACATGCTTCAGTTGTCGCAGGTGCTGGTGCAAGTGCTTCAGAAGGTGCTTCTGCAGACCAGGTTGCAGCTGTTGATGTTGCAAAGGAATGTTTGCTAGCTGCAGTAAAAGCAGATCCCAAATCAGGACATATATGGACAAATCTTGCCAATGCATTTTCTCTATGTGGTGATCATAGAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCAAGACTGGATCCTAATTGCATGTCTACTCGATATGCTGTTGCCATCCATAGAATAAAGGATGCTGAAAGATCTCTAGACCGGGAGCAGCTTTCTTGGGCTGGAAATGAGATGGCTTCTATAATAAGAGATGGTGATTCATCCTTGGTTGAGCTTCCCGTAGCATGGGCTGGGCTTGCCATGGTTCACAAGGCCCAACATGAAATAGCAGCCGCTTTTGAGACTGAACAAAATGACCTGATGGAAGTTGAAGAGCGTGCTGTCTGCATTTTAAAACAGGCTATAGCAGAAGATCCAGATGATGCTGTGCAGTGGCACCAACTCGGTCTTCATGGTCTCTGTACTCGGCAATTCAAAACATGTCAAAGGCACCTCAAAGCTGCTGTTGCCCGTGACAAGAATAACAGCTATGCATGGTCAAATCTAGGTGTTTCACTTCAACTATCAGAAGAGCAATCAAAAGCTGAAGAAGTATATAAGCAGGCATTGGCACTAGCGACAACACAACAAGCGCATGCTATATTATCCAATCTGGGGAATCTCTATCGCCAGCAGAAACAATATCAACGTGCCAAGGCAATGTTTACAAAGTCACTTGAACTACAACCTGGCTACGCTCCTGCATATAACAATCTGGGTCTCGTTTTTGTTGCCGAGGGTCTGTGGGAAGAGGCCAAGTATTGTTTTGACAAGGCCCTCCAATCAGATCCTCTACTGGATGCAGCAAAGTCTAACGAGATTAAGGCGGTTGCCATGTCAAAGTTATGCAGAGGCCTCTCCTCATGCTTTCTTAAAGAATAA 1956 0.4504 MPEPVEPQNHVLLPKPELGAAESSKVLQPPKFVVLADLNVDPPEADEDDDSPHVPPPEITMLTNEKSQEKSALSKDADSADGESKKLHKLGKCRSRFSKTDSSVDCGADGDGDQHVQGVASSREEKVSSLKTGLVHVARKMPKNAHAHFILGLMYQRLGQPQKALSAYEKAAEILLRSEAEISRPELLSLVQIHHAQCLILESAVENSSDKELEPQELEEILSKLKESVQSDIRQAAVWNTLGFVLLKTGRLQSAITVLSSLLAIAPDNYDCLENLGISYLQSGNLELSAKCFQELILKDQNHPAALINYAALLLCKHASVVAGAGASASEGASADQVAAVDVAKECLLAAVKADPKSGHIWTNLANAFSLCGDHRSSSKCLEKAARLDPNCMSTRYAVAIHRIKDAERSLDREQLSWAGNEMASIIRDGDSSLVELPVAWAGLAMVHKAQHEIAAAFETEQNDLMEVEERAVCILKQAIAEDPDDAVQWHQLGLHGLCTRQFKTCQRHLKAAVARDKNNSYAWSNLGVSLQLSEEQSKAEEVYKQALALATTQQAHAILSNLGNLYRQQKQYQRAKAMFTKSLELQPGYAPAYNNLGLVFVAEGLWEEAKYCFDKALQSDPLLDAAKSNEIKAVAMSKLCRGLSSCFLKE 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco13g0530 651 ProSiteProfiles TPR repeat region circular profile. 591 622 - -
Acco13g0530 651 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 29 647 - -
Acco13g0530 651 SUPERFAMILY TPR-like 350 622 IPR011990 GO:0005515
Acco13g0530 651 ProSiteProfiles TPR repeat profile. 236 269 IPR019734 GO:0005515
Acco13g0530 651 Gene3D Tetratricopeptide repeat domain 559 622 IPR011990 GO:0005515
Acco13g0530 651 MobiDBLite consensus disorder prediction 37 88 - -
Acco13g0530 651 ProSiteProfiles TPR repeat profile. 145 178 IPR019734 GO:0005515
Acco13g0530 651 MobiDBLite consensus disorder prediction 69 88 - -
Acco13g0530 651 Pfam Tetratricopeptide repeat 523 552 IPR019734 GO:0005515
Acco13g0530 651 Pfam Tetratricopeptide repeat 145 174 IPR013105 -
Acco13g0530 651 SUPERFAMILY TPR-like 142 394 IPR011990 GO:0005515
Acco13g0530 651 SMART tpr_5 521 554 IPR019734 GO:0005515
Acco13g0530 651 SMART tpr_5 487 520 IPR019734 GO:0005515
Acco13g0530 651 SMART tpr_5 270 303 IPR019734 GO:0005515
Acco13g0530 651 SMART tpr_5 591 624 IPR019734 GO:0005515
Acco13g0530 651 SMART tpr_5 557 590 IPR019734 GO:0005515
Acco13g0530 651 SMART tpr_5 236 269 IPR019734 GO:0005515
Acco13g0530 651 SMART tpr_5 145 178 IPR019734 GO:0005515
Acco13g0530 651 SMART tpr_5 359 392 IPR019734 GO:0005515
Acco13g0530 651 MobiDBLite consensus disorder prediction 101 124 - -
Acco13g0530 651 Gene3D Tetratricopeptide repeat domain 130 191 IPR011990 GO:0005515
Acco13g0530 651 MobiDBLite consensus disorder prediction 1 24 - -
Acco13g0530 651 ProSiteProfiles TPR repeat profile. 591 624 IPR019734 GO:0005515
Acco13g0530 651 Gene3D Tetratricopeptide repeat domain 192 467 IPR011990 GO:0005515
Acco13g0530 651 ProSiteProfiles TPR repeat profile. 557 590 IPR019734 GO:0005515
Acco13g0530 651 Pfam Tetratricopeptide repeat 557 619 - -
Acco13g0530 651 Gene3D Tetratricopeptide repeat domain 470 558 IPR011990 GO:0005515
Acco13g0530 651 Pfam Tetratricopeptide repeat 246 305 - -
Acco13g0530 651 Pfam Tetratricopeptide repeat 360 392 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco13g0530 472 623 Glycosyltransferase AT3G04240 28.105 3.62e-12 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco13g0530 13 3811067 3816500 Acco13g0530 13 3811067 3816500 ECH