Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2129 ATGGCCTGTCTCCCTCCTCCTCTGTTTTCTCTGATTTTGATTCTTTCTGCTGCTTGGTCTCTTTTTCCGGCGGAGTCAACCACATACTGGGGTGATATAGAGGCTCTGAAGCAACTCAAGAACGGCCTTCACAATGCTTCCTTGAATCCAGGTTCGTGTGTTACTTCTTGGGACCTCTCTGTCGACCCATGCGACAACCTCTTTAGCCAAAAATTCACGTGCGGCTTCCGGTGCGACGCTGTCGTCTCCGGGTCGAGTCGGGTCACCGAAATAACACTGGATCAGGTGGGTTACGCCGGCTCACTCGCATCCTCGTCTTGGAACCTTCCTTATTTAGAAACTCTCGATGTGTCTAACAACTACCTTTCCGGTGGGGTTCCTGAGTCCCTCTCCAACTTGACCCGTCTGCGCCGGCTCGCTCTCTCCGGGAATTTGTTGGGCGGTGAGATTCCCTCTTCCATTGGCTTCCTCTCGAAACTTGAAGAGCTTTACCTCGATAACAATAATCTTCAAGGGACAATCCCTTCTAGCTTGAACCGGCTCAAGAGCTTGAAAAGGCTCGAACTTCAACTCAACAATCTCACGGGTGAGATTCCTGATCTTGGTTCTCTCGAAAGCTTTTACTATCTCGACATCAGTGACAACGCTATCACTGGCAGAATCCCGGCGACGTTGCCCAAATCCTTAATTCAAATTTCAATGAGGAACAATAGCTTGAGCGGAGGTTTAAGATCGGAAAGCTTCAGGAGCTTGATCGATTTGCAGGTTCTGGATTTAAGTTATAACAGTCTGAAGGACTCTGTACCCGTAGTTCTGTTTGAGCTTCCTTCGCTGGAGCAGCTGACTCTGTCGTTCAACAAATTCTCGTCGGTGGAAGCGCCGTCTTACAATGTGGGATCACAGAGTGGGCTGATAGCGGTTGATCTGAGCAACAACGAGATTGAAGGGCTGTTGCCTTGGTTCATGGGAGTGATGCCGAAGCTGTCGGCATTGTCGTTGGAGAACAATAAGTTTGCGGGAATGATTCCGACGCAGTATGCGTTGAAGACGGTGTTGCCGGAAGTGGGAGTATCGCCGTTTGGGAGGCTAATACTGAGCGGCAATTACCTGATTGGGGGCATACCCAGCCCCTTGCTGCTACTCAAACCGGGTTCTGCGAATGTGACATTAGCAGACAATTGTTTGTTTAGATGCCCACTGAGGTTCTTTTTCTGCGACCAACAAAAATCGTTGCACGTATGCAACAGATTTAGCCCTTTCATCCCTTAG 1269 0.4949 MACLPPPLFSLILILSAAWSLFPAESTTYWGDIEALKQLKNGLHNASLNPGSCVTSWDLSVDPCDNLFSQKFTCGFRCDAVVSGSSRVTEITLDQVGYAGSLASSSWNLPYLETLDVSNNYLSGGVPESLSNLTRLRRLALSGNLLGGEIPSSIGFLSKLEELYLDNNNLQGTIPSSLNRLKSLKRLELQLNNLTGEIPDLGSLESFYYLDISDNAITGRIPATLPKSLIQISMRNNSLSGGLRSESFRSLIDLQVLDLSYNSLKDSVPVVLFELPSLEQLTLSFNKFSSVEAPSYNVGSQSGLIAVDLSNNEIEGLLPWFMGVMPKLSALSLENNKFAGMIPTQYALKTVLPEVGVSPFGRLILSGNYLIGGIPSPLLLLKPGSANVTLADNCLFRCPLRFFFCDQQKSLHVCNRFSPFIP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2129 422 SMART LRR_typ_2 133 155 IPR003591 -
Acco12g2129 422 SMART LRR_typ_2 109 132 IPR003591 -
Acco12g2129 422 SMART LRR_typ_2 157 181 IPR003591 -
Acco12g2129 422 SMART LRR_typ_2 251 274 IPR003591 -
Acco12g2129 422 SMART LRR_typ_2 275 298 IPR003591 -
Acco12g2129 422 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 10 410 - -
Acco12g2129 422 Gene3D Ribonuclease Inhibitor 31 203 IPR032675 -
Acco12g2129 422 SUPERFAMILY L domain-like 83 349 - -
Acco12g2129 422 ProSiteProfiles Leucine-rich repeat profile. 183 205 IPR001611 GO:0005515
Acco12g2129 422 FunFam Nuclear pore complex protein NUP107 30 200 - -
Acco12g2129 422 Gene3D Ribonuclease Inhibitor 204 422 IPR032675 -
Acco12g2129 422 PRINTS Leucine-rich repeat signature 251 264 - -
Acco12g2129 422 PRINTS Leucine-rich repeat signature 112 125 - -
Acco12g2129 422 Pfam Leucine rich repeat 108 146 IPR001611 GO:0005515
Acco12g2129 422 Pfam Leucine rich repeat 235 288 IPR001611 GO:0005515
Acco12g2129 422 Pfam Leucine rich repeat 159 217 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2129 6 378 Receptor kinase-like Gene Family AT1G08590 28.141 3.24e-29 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g2129 12 32807386 32808654 Acco12g2129 12 32807386 32808654 ECH