Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2108 ATGGAGCTAGTAGCTTCACACTTATCTCCAACTCTTCCCAGAAAGAAATTTCCTTCTCAAACTCTCCTTCCTGGACTTATCTCCAGAACTATATGCCTTCAAATCCCCCTTGAATTTTCATCCCAATTTTTCACTTTTATAAATAGGAATGGTCATTTTGAAGCATGTGCCCGTAAAAATGCAAGGGTCAGCGAACTAGAGTATAGCAGAGAAGTCGAAGGAGCAGAGGAACCACACACGACTTCTTCTTTGGACGACGACTCGTCTTTCTTGTCTCTCAGCGACAAACCTGACAGGAATTTGGCTTTATTGGACGATTATGAGGCGGAGGAGCTTGATTATGATTCCCACCCTGGCCATCAAAGCGGATATGTGGCTTTACTTGGGAAGCCTAATGTCGGGAAGAGTACACTGGCAAACCAAATGATTGGTCAAAAGTTGTCTATAGTTACACAGAAACCTCAAACAACAAGGCACCGCATTCTTGGTATATGTTCTGGCTCAGATTATCAGATAATACTTTACGATACACCTGGTGTTCTCAAGAAGGAAATGCACTTGTTGGACTCGATGATGATGAAGAATGTTCGCAGTGCTGCAGTTAATGCTGATTGTGTTTTAATTCTTGTTGATGCGTGTAAAGTTCCTGAAAATATTGATGACGTGTTGAAGGAAGGTGTAGGAGATCTCCAGGATAAGCCTCCCACTCTACTGATTCTTAATAAGAAGGATCTTATCAAACCTGGGGAAATTGCAAAGAAACTTGAGTGGTATCAGAAATACACTGATGTTGATGAGGTTATACCAGTTAGTGCTAAATATGGCCATGGTATTGAAGATGTCAAGGACTGGATACTATCAAAGCTTCCCAATGGACCAGCATACTATCCAAAGGACATTGTCAGTGAGCACCCAGAAAGATTTTTTGTGGGTGAAATTGTTCGAGAAAAGATCTTTATGCAGTACCGAAATGAAATACCCTATTCTTGCCAGGTGAATGTTGTAAGCTACAAGGCTCGGCCCAATGCAAAGTATTTCATACAAGTGGAGATTGTTGTTGAAAAAAATTCTCAGAAGATTATACTTATTGGAAGAGAGGGAAAGGCTTTGAAACTTCTTGCAACAGCTGCCCGTCTGGACATTGAAGACTTCCTACAGAAGAAAGTTTATCTTGAGATTGAAGTGAAAGTGAGAGAAAATTGGCGACAAGATGAAGGGCTTCTCAAGAACTATGGATATGGGGGCCAGATACGAGTTCTGTAA 1263 0.4117 MELVASHLSPTLPRKKFPSQTLLPGLISRTICLQIPLEFSSQFFTFINRNGHFEACARKNARVSELEYSREVEGAEEPHTTSSLDDDSSFLSLSDKPDRNLALLDDYEAEELDYDSHPGHQSGYVALLGKPNVGKSTLANQMIGQKLSIVTQKPQTTRHRILGICSGSDYQIILYDTPGVLKKEMHLLDSMMMKNVRSAAVNADCVLILVDACKVPENIDDVLKEGVGDLQDKPPTLLILNKKDLIKPGEIAKKLEWYQKYTDVDEVIPVSAKYGHGIEDVKDWILSKLPNGPAYYPKDIVSEHPERFFVGEIVREKIFMQYRNEIPYSCQVNVVSYKARPNAKYFIQVEIVVEKNSQKIILIGREGKALKLLATAARLDIEDFLQKKVYLEIEVKVRENWRQDEGLLKNYGYGGQIRVL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2108 420 NCBIfam GTPase Era 123 396 IPR005662 GO:0003723|GO:0005525
Acco12g2108 420 Gene3D - 119 302 IPR027417 -
Acco12g2108 420 Pfam KH domain 325 402 IPR004044 GO:0003723
Acco12g2108 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 323 IPR027417 -
Acco12g2108 420 Gene3D - 303 417 IPR015946 -
Acco12g2108 420 MobiDBLite consensus disorder prediction 70 92 - -
Acco12g2108 420 Hamap GTPase Era [era]. 120 413 IPR005662 GO:0003723|GO:0005525
Acco12g2108 420 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 298 413 IPR009019 GO:0003723
Acco12g2108 420 FunFam GTPase Era 118 301 - -
Acco12g2108 420 Pfam 50S ribosome-binding GTPase 125 242 IPR006073 GO:0005525
Acco12g2108 420 CDD Era 120 289 IPR030388 GO:0005525
Acco12g2108 420 FunFam GTPase Era 302 416 - -
Acco12g2108 420 CDD KH-II_Era 312 397 - -
Acco12g2108 420 NCBIfam small GTP-binding protein domain 125 284 IPR005225 GO:0005525
Acco12g2108 420 PANTHER GTPASE ERA 70 405 IPR005662 GO:0003723|GO:0005525
Acco12g2108 420 ProSiteProfiles Era-type guanine nucleotide-binding (G) domain profile. 121 291 IPR030388 GO:0005525
Acco12g2108 420 ProSiteProfiles Type-2 KH domain profile. 322 399 IPR004044 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2108 Acco-ChrAcco12 32556456 32560794 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g2108 12 32556456 32560794 Acco12g2108 12 32556456 32560794 ECH