Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2084 ATGTTCCTTTTTAAAAAGCAAACCCAGAATCAAGTGGAGAATGATCCCTCCCATAAAGATGCAAAGGTGGCTCAACTGAGGGATGCTCTGGGGCCATTATCTGGGCGAAGTCAAAAGTATTGCACAGACGCATGCCTGTGGAGATATTTAGAAGCCAGAAACTGGAATATTGATAAAGCCAAGAAAATGTTGGAAGAAACACTCAAATGGAGATCCACTTATAAGCCTGAGGAAATCCGTTGGCCTCAAGTGGCACACGAGGGTGAGACAGGAAAAGTGTCGAGAGCAAATTTTCATGATCGTTCTGGAAGAATTGTGCTTATAATGAGGCCAGGAATGCAGAACACGTCATGTCCAGAAGATAATATCAAGCATTTAGTGTACCTCATGGAAAATGCTATCCTTAATCTGCCCGAAGGGCAACAGCAGATGTCGTGGCTGATAGACTTCACTGGATTTTCACTCAGCCTTAACATTTCTGTCAAAACGGCTCGTGATATCATTTACATCTTACAAAACCACTATCCTGATAGGCTTGGTCTTGCTTTCTTGTACAACCCACCAAGGATATTTCAAGCTTTTTGGAAGGCTGTGAGATACTTCTTGGATCCCATCACATTCCAGAAGATAAAATTTGTTTATCCCAAGGACAAGGAGAGTGAAGAGCTGATGAAATCACTGTTTGACGTGGAAAATCTTCCCACTGAGTTTGGAGGAAAAGCAACATTGAAATATGATCACGAAGAATTTTCAAGGATGATGATAGAAGATGATGCAAAAACTGCTAAATTCTGGGGAGTTGATGACAAACTATTTCCCACTAAGAATGGCCATTCTATAGTATAG 846 0.4125 MFLFKKQTQNQVENDPSHKDAKVAQLRDALGPLSGRSQKYCTDACLWRYLEARNWNIDKAKKMLEETLKWRSTYKPEEIRWPQVAHEGETGKVSRANFHDRSGRIVLIMRPGMQNTSCPEDNIKHLVYLMENAILNLPEGQQQMSWLIDFTGFSLSLNISVKTARDIIYILQNHYPDRLGLAFLYNPPRIFQAFWKAVRYFLDPITFQKIKFVYPKDKESEELMKSLFDVENLPTEFGGKATLKYDHEEFSRMMIEDDAKTAKFWGVDDKLFPTKNGHSIV 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2084 281 SUPERFAMILY CRAL/TRIO N-terminal domain 8 81 IPR036273 -
Acco12g2084 281 MobiDBLite consensus disorder prediction 1 20 - -
Acco12g2084 281 FunFam Phosphatidylinositol transfer protein 3 3 274 - -
Acco12g2084 281 PANTHER GH16843P 8 270 - -
Acco12g2084 281 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Acco12g2084 281 Pfam CRAL/TRIO domain 93 239 IPR001251 -
Acco12g2084 281 CDD SEC14 99 240 IPR001251 -
Acco12g2084 281 Gene3D - 3 270 IPR036865 -
Acco12g2084 281 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
Acco12g2084 281 Pfam CRAL/TRIO, N-terminal domain 41 66 IPR011074 -
Acco12g2084 281 SUPERFAMILY CRAL/TRIO domain 81 257 IPR036865 -
Acco12g2084 281 SMART sec14_4 87 242 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2084 Acco-ChrAcco12 32434551 32436447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2084 46 234 Acyl Lipid Metabolism Gene Families AT1G55840 26.442 1.64e-10 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g2084 12 32434551 32436447 Acco12g2084 12 32434551 32436447 ECH