Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2059 ATGATAAGGTTAGCTGTCGCAGAGGGAAGTGGTACAGAGCGTCGAGTAGCCCAAAAAACAAAGACGGAAGACGGCTTTTTGTGTCCAAAAAAATATAAGTTGCTGCTTCCAAGTCCGCCAGCTGCAAAAACCTCCAATTGCTCCTTCTCTCTCTCTCTCAAACCAGATTTGTACGTAGATTTCTCTCTGCTAATCCGATCCTTCACTTCTCTCCCGTTTACGTTTCCCGAGTTCTTGATCTTGAATATGATTAAACTTTTTAAAGTAAAGGAAAAACAGAGGGAACTTGCAGAGAATGCAAGTGGTGGAGCACCGATTAAGAAACAAACTGCTGGGGAGTTGCGTCTGCACAAAGATATAAGTGAGCTGAATCTACCAAAATCTTGTGCCATGCAATTTCCCAATGGTAAAGATGACCTGATGAACTTTGAAGTTTCAATTCGGCCTGATGAAGGATATTACATGGGTGGTACTTTTTTGTTTTCCTTCCAAGTGTCTCCCATCTATCCTCACGAGGCACCAAAAGTCAAGTGCAAGACAAAGGTCTACCATCCCAATATCGACTTGGAAGGAAATGTTTGCCTTAACATCTTGCGAGAAGATTGGAAACCTGTTCTGAATATAAACACAGTCATTTATGGATTGTATCATCTTTTCACGGAGCCAAATTATGAAGACCCTCTCAATCATGATGCGGCGGCAGTTTTGAGAGAGAATCCGAAATTGTTCGAGTCTAATGTAAGGAGGGCTATGGCTGGTGGGTACGTGGGGCAAATCTTTTTCCCTCGCTGTATGTAA 798 0.4261 MIRLAVAEGSGTERRVAQKTKTEDGFLCPKKYKLLLPSPPAAKTSNCSFSLSLKPDLYVDFSLLIRSFTSLPFTFPEFLILNMIKLFKVKEKQRELAENASGGAPIKKQTAGELRLHKDISELNLPKSCAMQFPNGKDDLMNFEVSIRPDEGYYMGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPKLFESNVRRAMAGGYVGQIFFPRCM 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2059 265 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 111 256 IPR000608 -
Acco12g2059 265 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 183 198 IPR023313 -
Acco12g2059 265 Gene3D Ubiquitin Conjugating Enzyme 107 265 IPR016135 -
Acco12g2059 265 CDD UBCc 115 249 IPR000608 -
Acco12g2059 265 SMART ubc_7 114 256 - -
Acco12g2059 265 Pfam Ubiquitin-conjugating enzyme 115 250 IPR000608 -
Acco12g2059 265 FunFam NEDD8-conjugating enzyme Ubc12 107 265 - -
Acco12g2059 265 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 139 242 - -
Acco12g2059 265 SUPERFAMILY UBC-like 106 263 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2059 Acco-ChrAcco12 32206202 32210909 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g2059 12 32206202 32210909 Acco12g2059 12 32206202 32210909 ECH