Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g2047 ATGTCTTCTCTCTCCTCCCTCCCTCTCCTCCTCCTCCTCCTCTTCTTCTCACCCACCATTTCCACCACCCCTCGCTTCAAACAAGCCCCTCGCTTCTACAACTCTCCCACCTGCCCCGCCACCGACGCTGCCGTCCACGTCGCAATGACCCTTGACCTCTCCTACCTCCGAGGCTCCATGGCCGCCATCTTCTCCATACTCCAACACTCTTCCTGTCCCGATAACATCGTCTTCCACTTCGTCTCTGCCTCCTCCAAGCCTTCCTCCTCCTCCATCCTCAACCACACTCTCTTCACTTCCTTCCCTTACCTCCGTTTCCGAATCTATCCGTTCGATGACACCACCGTCTCCGGCCTCATCTCCTCCTCCATACGCTCCGCATTGGACTGCCCCCTCAACTACGCCCGCAGCTACCTCGCCAACCTCCTCCCGCCTTCCGTCCGCAAAGTAGTCTACCTCGACTCCGACCTAGTCCTCGTTGACGACATAGCTGAGCTCGCGGCAACGCCGCTCGGCTCCCACTCGGTCCTCGCCGCGCCAGAATACTGCAACGCCAATTTCACCTACTACTTCACGCCGTCGTTTTGGTCAAACCCGTCCCTGTCGCTCACGTTCGCCGGTCGGAGGGCGTGTTATTTTAACACGGGCGTTATGGTGATCGATTTGGAGCGATGGCGGGAAGGGGATTACACGAGGAGGATTGAGGAGTGGATGCAGCTGCAGAAGAGAATGCGGATCTATGAGCTGGGATCGTTGCCGCCGTTCTTGCTGGTGTTCGCGGGAAATATAGCTCCGGTAGATCACAGGTGGAACCAGCACGGGCTTGGCGGTGACAACTACCGGGGGCTTTGCCGGGAGTTGCACGCCGGCCCGGCGAGCCTCTTGCATTGGAGCGGGAAGGGAAAGCCTTGGGCCCGATTGGACGCAAACAGGCCTTGCCCGTTGGATGCGTTATGGTCTCCTTACGATCTTCTCGATACGCCTTTTGCTCTGGAGGCCTAG 1002 0.5878 MSSLSSLPLLLLLLFFSPTISTTPRFKQAPRFYNSPTCPATDAAVHVAMTLDLSYLRGSMAAIFSILQHSSCPDNIVFHFVSASSKPSSSSILNHTLFTSFPYLRFRIYPFDDTTVSGLISSSIRSALDCPLNYARSYLANLLPPSVRKVVYLDSDLVLVDDIAELAATPLGSHSVLAAPEYCNANFTYYFTPSFWSNPSLSLTFAGRRACYFNTGVMVIDLERWREGDYTRRIEEWMQLQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRELHAGPASLLHWSGKGKPWARLDANRPCPLDALWSPYDLLDTPFALEA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g2047 333 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 46 312 IPR029044 -
Acco12g2047 333 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 10 326 - -
Acco12g2047 333 FunFam Hexosyltransferase 46 313 - -
Acco12g2047 333 Pfam Glycosyl transferase family 8 46 306 IPR002495 GO:0016757
Acco12g2047 333 SUPERFAMILY Nucleotide-diphospho-sugar transferases 45 324 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g2047 Acco-ChrAcco12 32043359 32044360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g2047 10 331 Glycosyltransferase AT3G50760 67.964 1.57e-168 471
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g2047 12 32043359 32044360 Acco12g2047 12 32043359 32044360 ECH