Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1771 ATGGCCATGGCGGCCACGAAGGACCCGCCATCACCGGCCTTTCTCGATACTATCGACGAGATTACGAGAATTTACAGATCGCTTCCCCTTCGACCTTCGATTGAAGAAGTCGAAGCTGCGACTTCTGCTATTGAAACTATCAATAGCGAGGAGAATATGAAGCTCCAGGAAATCTCAATGCAGCAAGTCCCTGACGGTGTTCCCGAGCAGCTTTTCTCTCTGTTACAGGAATTGAAGAAGACCGTGGTCTTGTTCCAGAGCCATGAACAGAGGAAAGAAGCTCTCCACCTTCTTCAACAAGAGAAGATGTTTCAGACCCTCGGTGATCTTATTCAGAGGGCTTCTCAGTTCATTTCTGGGGAAGCTACGGAACCGGAACCGCCCAATAAAGTCGAACCGGCGGGGGAAATTGAGATTGACTTTCTTATCGGTGATGACAGTCTGGTGAAGGGAAAGGAAGACGGAGATAAACCGGAGAAAATCAACCTCAACGTTGAAAGAAGATCGTCTGCTAAGACATCTTTCTCTACTGCTGATGGAAACCCTGAGAAACTAAGTCTCATGAAAGTGGCCACTGTTATTGAAACCTGTGCTAATAGTGGAGCAACAATCCTTGAACTTAGAGGGAAACTTGTGGACCAGATGGAATGGTTGCCTGTTTCAATTGGGAAACTCTCTAATGTGTGTGAGATGGACCTATCTGAGAACAGAATCATGGCTCTTCCTTCCACCTTTGGGGAGCTCAAGGCCTTAACAAAGCTTGATTTTCATGCCAACCAGCTTATAAACCTTCCACACTCTTTTGGGGAATTGATCAACCTCACCGATGTTGACCTCCGTGGCAATAGGTTGAGATCACTGCCAGCTTCTTTTGAAAAGTTGGAGAATCTCATTGCTCTTGACCTGAGTTCAAATGAGTTCGCACAATTACCTGATTTGATTGGGAATTTAAGAAGCTTGAGGAGATTAAACGTTGAGATGAACGAACTTGAGGAGCTACCTTATACGATTGGAAATTGCTCGTCACTCTCAGAGTTGACATTAGACTTTAATCAGCTCAAAGCCCTTCCTGAAGCAATTGGGAATCTTGAGTTATTAGAGATTTTAACTCTGCACTATAACAGAGTTAAAAGGTTGCCTACTACAACGGGGAACCTGAGAAGATTGAAGGAACTTGACGCTAGCTTTAATGAACTCGAATTCATACCAGAGAACCTATGTTTTGCTGTGAGTCTGAAGAAATTAAACGTGTCTAATAACTTTGCAGACCTAAGAGCCTTGCCAAAATCAATTGGGAATCTTGAAATGCTTGAGGAGTTGGATATAAGTGATGATCAAATAAAAGCATTACCAGAGTCTTTCGGGTTCTTGTCCAAATTGAGAGTTTTTCGTGCTGATCAGACTCCTCTTGAAGTACCACCCAGAGAAGTGGTCAAGTTGGGTGCTCAGGAAGTTGTGAAGTACATGGCCAATTTTGTAGCCAAGAGGGATGCGAAACTTCTGGTACCAAAGAAGAAGGAGGGGGGGTTCTGGTTCTGGTTTTGCTCAATATTTTGCCCCCAACGGAGACGATTCTGA 1578 0.443 MAMAATKDPPSPAFLDTIDEITRIYRSLPLRPSIEEVEAATSAIETINSEENMKLQEISMQQVPDGVPEQLFSLLQELKKTVVLFQSHEQRKEALHLLQQEKMFQTLGDLIQRASQFISGEATEPEPPNKVEPAGEIEIDFLIGDDSLVKGKEDGDKPEKINLNVERRSSAKTSFSTADGNPEKLSLMKVATVIETCANSGATILELRGKLVDQMEWLPVSIGKLSNVCEMDLSENRIMALPSTFGELKALTKLDFHANQLINLPHSFGELINLTDVDLRGNRLRSLPASFEKLENLIALDLSSNEFAQLPDLIGNLRSLRRLNVEMNELEELPYTIGNCSSLSELTLDFNQLKALPEAIGNLELLEILTLHYNRVKRLPTTTGNLRRLKELDASFNELEFIPENLCFAVSLKKLNVSNNFADLRALPKSIGNLEMLEELDISDDQIKALPESFGFLSKLRVFRADQTPLEVPPREVVKLGAQEVVKYMANFVAKRDAKLLVPKKKEGGFWFWFCSIFCPQRRRF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1771 525 PANTHER - 214 421 - -
Acco12g1771 525 SMART LRR_typ_2 248 270 IPR003591 -
Acco12g1771 525 SMART LRR_typ_2 225 247 IPR003591 -
Acco12g1771 525 SMART LRR_typ_2 363 385 IPR003591 -
Acco12g1771 525 SMART LRR_typ_2 271 293 IPR003591 -
Acco12g1771 525 SMART LRR_typ_2 341 362 IPR003591 -
Acco12g1771 525 SMART LRR_typ_2 317 340 IPR003591 -
Acco12g1771 525 SMART LRR_typ_2 294 316 IPR003591 -
Acco12g1771 525 SMART LRR_typ_2 434 457 IPR003591 -
Acco12g1771 525 SMART LRR_typ_2 386 409 IPR003591 -
Acco12g1771 525 FunFam Plant intracellular Ras-group-related LRR protein 4 184 492 - -
Acco12g1771 525 SUPERFAMILY L domain-like 196 471 - -
Acco12g1771 525 SMART LRR_bac_2 294 313 - -
Acco12g1771 525 SMART LRR_bac_2 271 290 - -
Acco12g1771 525 SMART LRR_bac_2 434 453 - -
Acco12g1771 525 SMART LRR_bac_2 248 267 - -
Acco12g1771 525 SMART LRR_bac_2 340 359 - -
Acco12g1771 525 SMART LRR_bac_2 317 336 - -
Acco12g1771 525 SMART LRR_bac_2 409 430 - -
Acco12g1771 525 SMART LRR_bac_2 386 405 - -
Acco12g1771 525 SMART LRR_bac_2 363 382 - -
Acco12g1771 525 ProSiteProfiles Leucine-rich repeat profile. 296 317 IPR001611 GO:0005515
Acco12g1771 525 Pfam Leucine rich repeat 273 330 IPR001611 GO:0005515
Acco12g1771 525 Gene3D Ribonuclease Inhibitor 177 501 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1771 Acco-ChrAcco12 28846198 28848573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1771 153 461 Receptor kinase-like Gene Family AT1G28440 28.571 4.01e-21 95.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1771 12 28846198 28848573 Acco12g1771 12 28846198 28848573 ECH